Gene EcHS_A2982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A2982 
SymbollplT 
ID5595492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp2990989 
End bp2992182 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content56% 
IMG OID640922101 
Productlysophospholipid transporter LplT 
Protein accessionYP_001459606 
Protein GI157162288 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0020769 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAGT CAGTGCACAC TAACACTTCG TTGTGGTCGA AGGGGATGAA AGCGGTTATC 
GTGGCGCAGT TTCTCTCTGC GTTTGGCGAT AACGCGCTAC TGTTTGCCAC TCTGGCGTTA
CTGAAAGCGC AGTTCTATCC GGAGTGGAGC CAGCCCATCC TGCAAATGGT GTTTGTAGGT
GCTTACATTC TTTTTGCGCC GTTTGTCGGG CAGGTGGCGG ATAGCTTCGC CAAAGGCCGG
GTGATGATGT TTGCCAACGG CCTGAAGCTG CTGGGCGCAG CCAGTATCTG CTTTGGTATC
AATCCGTTTC TCGGCTATAC GCTGGTGGGT GTTGGTGCTG CAGCCTATTC ACCGGCGAAA
TACGGTATTC TCGGCGAATT AACCACGGGT AGTAAGTTAG TAAAAGCTAA CGGTTTAATG
GAAGCTTCTA CCATAGCGGC GATTTTACTC GGTTCCGTAG CCGGTGGTGT GCTGGCTGAC
TGGCATGTAC TCGTCGCCCT GGCCGCATGC GCACTGGCCT ACGGTGGTGC GGTCGTTGCC
AATATCTACA TTCCCAAACT GGCGGCGGCG CGTCCGGGGC AGTCCTGGAA TCTCATCAAC
ATGACCCGCA GTTTCCTGAA TGCCTGCACC TCGCTATGGC GCAATGGTGA AACGCGTTTT
TCGCTGGTGG GCACCAGTTT ATTCTGGGGA GCGGGTGTCA CGCTGCGTTT CCTGTTGGTG
CTGTGGGTAC CGGTGGCGCT GGGCATTACC GATAACGCTA CGCCGACCTA TCTCAACGCG
ATGGTAGCGA TTGGTATCGT GGTTGGCGCA GGTGCGGCAG CGAAGCTGGT TACGCTGGAA
ACCGTGTCAC GCTGTATGCC AGCCGGGATT TTGATTGGCG TGGTGGTACT GATTTTCTCC
CTGCAACACG AGCTGCTGCC AGCCTATGCC TTGTTGATGC TGATTGGCGT GTTGGGGGGC
TTTTTTGTCG TTCCGCTCAA TGCGTTGCTA CAGGAGCGGG GTAAAAAAAG CGTCGGGGCG
GGGAATGCGA TTGCAGTACA AAACCTTGGC GAAAACAGCG CCATGTTGTT GATGCTGGGC
ATTTACTCGC TGGCGGTAAT GGTAGGCATC CCGGTCGTGC CCATTGGCAT TGGCTTTGGT
ACGCTGTTTG CGCTGGCAAT AACGGCGCTG TGGATCTGGC AGCGCCGTCA TTAA
 
Protein sequence
MSESVHTNTS LWSKGMKAVI VAQFLSAFGD NALLFATLAL LKAQFYPEWS QPILQMVFVG 
AYILFAPFVG QVADSFAKGR VMMFANGLKL LGAASICFGI NPFLGYTLVG VGAAAYSPAK
YGILGELTTG SKLVKANGLM EASTIAAILL GSVAGGVLAD WHVLVALAAC ALAYGGAVVA
NIYIPKLAAA RPGQSWNLIN MTRSFLNACT SLWRNGETRF SLVGTSLFWG AGVTLRFLLV
LWVPVALGIT DNATPTYLNA MVAIGIVVGA GAAAKLVTLE TVSRCMPAGI LIGVVVLIFS
LQHELLPAYA LLMLIGVLGG FFVVPLNALL QERGKKSVGA GNAIAVQNLG ENSAMLLMLG
IYSLAVMVGI PVVPIGIGFG TLFALAITAL WIWQRRH