Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A2963 |
Symbol | amiC |
ID | 5594625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 2966076 |
End bp | 2967329 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640922082 |
Product | N-acetylmuramoyl-L-alanine amidase AmiC |
Protein accession | YP_001459587 |
Protein GI | 157162269 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGGAT CCAACACTGC AATCAGCCGT CGTCGTTTAC TGCAAGGCGC GGGTGCCATG TGGCTATTGA GCGTAAGTCA GGTCAGTCTG GCTGCGGTCA GCCAGGTCGT GGCGGTGCGC GTCTGGCCTG CGTCCAGCTA CACCCGCGTG ACGGTGGAAT CAAATCGTCA GCTGAAATAT AAGCAGTTCG CGTTGAGTAA CCCTGAACGC GTGGTGGTGG ATATCGAAGA TGTAAACCTG AACTCGGTAC TCAAGGGGAT GGCGGCACAA ATTCGTGCAG ACGACCCGTT CATCAAGTCG GCGCGCGTCG GGCAATTTGA CCCGCAAACC GTACGGATGG TTTTTGAATT AAAGCAAAAC GTAAAACCGC AGCTGTTTGC CCTTGCGCCG GTCGCCGGGT TTAAAGAGCG TCTGGTGATG GACCTCTATC CGGCCAATGC ACAGGATATG CAGGACCCGC TGCTGGCGCT GCTGGAGGAT TACAACAAAG GCGACCTCGA AAAGCAGGTG CCGCCAGCGC AAAGTGGTCC ACAACCGGGT AAAGCAGGGC GCGATCGTCC GATTGTCATT ATGCTTGACC CTGGCCACGG TGGCGAAGAC TCCGGTGCGG TGGGGAAATA CAAAACGCGC GAAAAAGATG TGGTATTGCA AATAGCTCGC CGTTTGCGCT CTCTGATCGA GAAAGAGGGC AATATGAAGG TGTACATGAC GCGCAATGAA GACATCTTCA TTCCATTGCA AGTGCGCGTA GCAAAAGCCC AGAAACAGCG TGCTGACCTG TTTGTCTCTA TCCATGCCGA CGCCTTTACC AGTCGTCAGC CGAGCGGTTC CTCTGTGTTT GCGCTCTCAA CCAAAGGTGC AACCAGTACT GCGGCAAAAT ATCTGGCACA AACCCAGAAC GCCTCGGACT TGATTGGTGG CGTGAGCAAA AGCGGTGACC GCTATGTCGA CCACACCATG TTCGATATGG TACAGTCGCT GACCATTGCC GACAGCCTGA AGTTTGGTAA AGCGGTACTG AATAAGCTCG GTAAAATCAA CAAGCTGCAT AAAAATCAAG TTGAACAGGC CGGGTTTGCC GTACTAAAGG CACCAGATAT TCCCTCCATT CTGGTCGAAA CGGCGTTTAT CAGTAACGTT GAGGAAGAGC GTAAACTGAA AACGGCGACT TTCCAGCAGG AAGTTGCGGA GTCTATTCTT GCGGGGATTA AAGCGTATTT TGCCGATGGG GCGACGCTGG CGAGAAGGGG ATGA
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Protein sequence | MSGSNTAISR RRLLQGAGAM WLLSVSQVSL AAVSQVVAVR VWPASSYTRV TVESNRQLKY KQFALSNPER VVVDIEDVNL NSVLKGMAAQ IRADDPFIKS ARVGQFDPQT VRMVFELKQN VKPQLFALAP VAGFKERLVM DLYPANAQDM QDPLLALLED YNKGDLEKQV PPAQSGPQPG KAGRDRPIVI MLDPGHGGED SGAVGKYKTR EKDVVLQIAR RLRSLIEKEG NMKVYMTRNE DIFIPLQVRV AKAQKQRADL FVSIHADAFT SRQPSGSSVF ALSTKGATST AAKYLAQTQN ASDLIGGVSK SGDRYVDHTM FDMVQSLTIA DSLKFGKAVL NKLGKINKLH KNQVEQAGFA VLKAPDIPSI LVETAFISNV EEERKLKTAT FQQEVAESIL AGIKAYFADG ATLARRG
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