Gene EcHS_A2949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A2949 
SymbolfucR 
ID5594174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp2957577 
End bp2958308 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content48% 
IMG OID640922067 
ProductDNA-binding transcriptional activator FucR 
Protein accessionYP_001459577 
Protein GI157162259 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.000000516509 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCGG CACGCCAGCA AGCGATAGTC GACCTGCTGC TGAACCATAC CAGCCTGACC 
ACGGAAGCTC TCTCTGAACA GCTAAAGGTC AGTAAAGAAA CCATTCGTCG CGATCTCAAT
GAATTACAGA CGCAGGGTAA AATTCTGCGC AATCATGGAC GCGCTAAATA TATCCACCGT
CAAAATCAAG ACAGTGGCGA TCCCTTTCAC ATCAGGCTGA AAAGCCATTA TGCGCATAAA
GCAGATATCG CGCGCGAGGC GCTCGCGTGG ATTGAAGAAG GGATGGTGAT AGCCTTAGAC
GCCAGTTCAA CTTGCTGGTA TCTGGCACGC CAGTTGCCTG ACATCAACAT TCAGGTCTTC
ACCAATAGCC ATCCGATTTG CCATGAACTC GGTAAACGCG AACGCATTCA ACTGATCAGT
TCCGGCGGCA CACTTGAGCG CAAATATGGC TGTTACGTCA ATCCCTCGCT GATTTCCCAA
CTTAAATCGC TGGAAATCGA TCTGTTTATT TTTTCTTGTG AAGGGATCGA TAGCAGCGGC
GCACTGTGGG ACTCCAATGC CATCAACGCT GATTACAAAT CGATGCTATT AAAACGTGCC
GCGCAATCGT TGTTATTGAT TGATAAAAGT AAATTTAATC GTTCAGGGGA AGCCCGCATC
GGGCATCTGG ATGAGGTAAC GCACATTATT TCTGATGAGC GCCAGGTTGC AACTTCTTTG
GTAACAGCCT GA
 
Protein sequence
MKAARQQAIV DLLLNHTSLT TEALSEQLKV SKETIRRDLN ELQTQGKILR NHGRAKYIHR 
QNQDSGDPFH IRLKSHYAHK ADIAREALAW IEEGMVIALD ASSTCWYLAR QLPDINIQVF
TNSHPICHEL GKRERIQLIS SGGTLERKYG CYVNPSLISQ LKSLEIDLFI FSCEGIDSSG
ALWDSNAINA DYKSMLLKRA AQSLLLIDKS KFNRSGEARI GHLDEVTHII SDERQVATSL
VTA