Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A2941 |
Symbol | sdaB |
ID | 5594010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 2947785 |
End bp | 2949152 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640922059 |
Product | L-serine ammonia-lyase |
Protein accession | YP_001459569 |
Protein GI | 157162251 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 0.73805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAGCG TATTCGATAT TTTCAAAATC GGCATTGGCC CTTCCAGTTC TCATACCGTT GGACCAATGA AAGCGGGTAA ACAATTTACC GACGATCTGA TTGCCCATAA TCTGCTTAAA GACGTGACCC GCGTGGTGGT TGACGTGTAC GGCTCGCTCT CTCTGACCGG TAAAGGCCAC CACACTGATA TCGCCATTAT TATGGGCCTG GCGGGTAACC TGCCGGATAC CGTGGATATC GATTCCATCC CTGGTTTTAT TCAGGATGTG AATACTCATG GTCGCCTGAT GCTGGCAAAC GGTCAGCATG AAGTGGAGTT CCCGGTTGAT CAGTGCATGA ACTTCCATGC AGACAACCTT TCTCTGCATG AAAACGGTAT GCGCATTACC GCGCTGGCGG GCGATAAAGT CGTTTACAGC CAGACTTACT ACTCTATTGG CGGTGGCTTT ATCGTTGATG AAGAGCATTT TGGCCAGCAG AATAGCGCAC CGGTTGAAGT TCCTTATCCG TACAGTTCAG CAGCCGATCT GCAAAAACAT TGTCAGGAAA CCGGGCTGTC ACTCTCTGGC CTGATGATGA AAAATGAGCT GGCGCTGCAC AGCAAAGAAG AGCTGGAACA GCACCTGGCG AACGTATGGG AAGTCATGCG TGGCGGTATT GAGCGCGGTA TTTCCACCGA AGGCGTGTTG CCTGGCAAAC TGCGCGTTCC ACGCCGTGCT GCGGCACTAC GCCGGATGCT GGTCAGCCAG GATAAAACCA CCACTGACCC GATGGCGGTT GTTGACTGGA TCAACATGTT TGCACTGGCA GTGAACGAAG AGAACGCTGC TGGCGGACGC GTGGTGACTG CGCCGACTAA CGGTGCGTGC GGGATTATCC CGGCAGTGCT GGCGTACTAC GACAAGTTTA TCCGCGAAGT GAACGCTAAC TCACTGGCTC GTTACCTGCT GGTAGCCAGT GCCATTGGTT CTCTTTATAA GATGAACGCG TCAATTTCTG GTGCTGAAGT CGGCTGCCAG GGTGAAGTTG GTGTGGCGTG CTCAATGGCG GCGGCTGGTC TGGCAGAGCT GTTAGGTGCA AGCCCGGCGC AGGTGTGCAT CGCGGCGGAA ATCGCCATGG AGCACAACCT CGGTCTGACG TGTGACCCGG TCGCCGGACA GGTCCAGGTG CCATGCATCG AGCGTAACGC CATTGCGGCA GTAAAAGCGG TGAACGCCGC ACGTATGGCG CTACGCCGTA CCAGCGAGCC GCGCGTCTGC CTCGATAAAG TTATCGAAAC CATGTACGAA ACAGGTAAAG ATATGAACGC CAAGTACCGC GAAACCTCTC GCGGCGGCCT GGCAATGAAG ATCGTTGCCT GCGATTAA
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Protein sequence | MISVFDIFKI GIGPSSSHTV GPMKAGKQFT DDLIAHNLLK DVTRVVVDVY GSLSLTGKGH HTDIAIIMGL AGNLPDTVDI DSIPGFIQDV NTHGRLMLAN GQHEVEFPVD QCMNFHADNL SLHENGMRIT ALAGDKVVYS QTYYSIGGGF IVDEEHFGQQ NSAPVEVPYP YSSAADLQKH CQETGLSLSG LMMKNELALH SKEELEQHLA NVWEVMRGGI ERGISTEGVL PGKLRVPRRA AALRRMLVSQ DKTTTDPMAV VDWINMFALA VNEENAAGGR VVTAPTNGAC GIIPAVLAYY DKFIREVNAN SLARYLLVAS AIGSLYKMNA SISGAEVGCQ GEVGVACSMA AAGLAELLGA SPAQVCIAAE IAMEHNLGLT CDPVAGQVQV PCIERNAIAA VKAVNAARMA LRRTSEPRVC LDKVIETMYE TGKDMNAKYR ETSRGGLAMK IVACD
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