Gene EcHS_A2901 details

Gene Information

• Locus tag: EcHS_A2901
• Symbol: cas3
• ID: 5595096
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: -
• Start bp: 2901786
• End bp: 2904452
• Gene Length: 2667 bp
• Protein Length: 888 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640922018
• Product: hypothetical protein
• Protein accession: YP_001459529
• Protein GI: 157162211
• COG category: [R] General function prediction only
• COG ID: [COG1203] Predicted helicases
• TIGRFAM ID: [TIGR01587] CRISPR-associated helicase Cas3

Plasmid Coverage information

• Num covering plasmid clones: 40
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACCTT TTAAATATAT ATGTCATTAC TGGGGGAAAT CCTCAAAAAG CCTGACGAAA 
GGAAATGATA TTCATCTGTT GATTTATCAT TGCCTGGATG TTGCAGCTGT TGCAGATTGC 
TGGTGGGATC AATCAGTCGT ACTACAAAAT GCTTTTTGCC GAAATGAAAT GCTATCAAAA 
CAGAGGGTGA AGGCCTGGCT GTTATTTTTC ATTGCTCTTC ATGATATTGG AAAGTTTGAT 
ATACGATTCC AATATAAATC AGCAGAAAGT TGGCTGAAAT TAAATCCTGC AACGCCATCA 
CTTAATGGTC CATCAACACA AATGTGCCGT AAATTTAATC ATGGTGCAGC CGGTCTGTAT 
TGGTTTAACC AGGATTCACT TTCAGAGCAA TCTCCCGGGG ATTTTTTCAG TTTTTTTGAT 
GCCGCGCCTC ATCCTTATGA GTCCTGGTTT CCATGGGTAG AGGCCGTTAC AGGACATCAT 
GGTTTTATAT TACATTCCCA GGATCAAGAT AAGTCGCGTT GGGAAATGCC AGCTTCTTTG 
GCATCTTATG CTGCGCAAGA TAAACAGGCT CGTGAGGAGT GGATATCTGT ACTCGAAGCA 
TTATTTTTAA CGCCAGCCGG GTTATCTATA AACGATATAC CACCTGATTG TTCATCATTG 
TTAGCAGGTT TTTGCTCGCT TGCTGACTGG TTAGGTTCCT GGACCACAAC GGATACCTTT 
CTATTCAAAG AAGATGCACC TTCAGGCATA CAAGCGCTAA GAACATATTT TCAGGATAGA 
CAGCAGGATG CGTGTCGGGT ACTGGCGCTG AGTGGCCTTG TATCAAATAA GCGTCGTTAT 
GACGGCGTAC ATGCCTTACT GGACAATGGC TATCAACCAA GACAATTACA GGTGTTGGTT 
GATGCTCTTC CTGCAGCTCC CGGGCTGACG GTGATTGAGG CACCTACGGG ATCAGGTAAA 
ACCGAAACAG CGCTGGCCTA TGCCTGGAAA CTTATTGACC AACAACTTGC GGATAGTGTT 
ATTTTTGCCC TCCCTACACA AGCTACTGCA AATGCAATGC TCAGCAGAAT GGAAGCGAAC 
GCGAGCCGTT TATTTACCTC CCCAAATCTT ATTCTTGCTC ATGGTAATTC ACGTTTTAAC 
CACCTTTTTC AATCAATAAA ATCACGCGCA TTTACTGAGC AGGGGCAAGA AGAAGCATGG 
GTTCAGTGTT GTCAGTGGTT GTCACAAAGC AATAAGAAAG TGTTTCTTGG GCAAATCGGC 
GTTTGCACGA TTGATCAGGT GTTGATATCG GTATTGCCAG TTAAACACCG CTTTATCCGT 
GGTTTGGGAA TTGGTCGAAG TGTTTTAATT GTTGATGAAG TTCATGCTTA CGACACGTAT 
ATGAACGGCT TGCTGGAGGC TGTGCTCAAG GCTCAGGCTG ATGTGGGGGG GAGTGTTATT 
CTTCTTTCCG CAACTCTACC AATGAAACAA AAACAGAAAC TTCTGGATAC TTATGGTCTG 
CATACAGATC CAGAGGAAAA TAACTCCGCA TATCCACTCA TTAACTGGCG AGGTGTGAAT 
GGTGCGCAAC GTTTTGATCT GTTAGCTCAT CCAGAACAAC TCCCGCCCCG CTTTTCAATT 
CAGCCAGAAC CTATTTATTT AGCTGACATG TTACCTGACC TTACGATGTT AGAGCGAATG 
ATCGCAGCGG CAAACGCGGG TGCACAAGTC TGTCTTATTT GCAATTTAGT TGACGTTGCA 
CAAGTATGCT ATCAACGGCT AAAGGAGCTA AATAACACGC AAGTAGATAT AGATTTGTTT 
CATGCACGCT TTACGCTGAA CTCTCGTCGA GAAAAAGAGA ATCGAGTTAT TAGCAATTTC 
GGCAAAAATG GGAAGCGAAA TGTTGGACGG ATACTTGTCG CCACCCAGGT CGTGGAACAA 
TCACTCGACG TTGATTTTGA TTGGTTAATT ACTCAGCATT GTCCTGCAGA TTTGCTTTTC 
CAACGATTGG GTCGTTTACA TCGCCATCAT CGCAAATATC GTCCCGCTGG TTTTGAGATT 
CCTCTGGCAA CCGTTTTGCT GCCTGATGGC GAAGGTTACG GACGACATGA GCACATTTAT 
AGCAACGTTA GAGTCATGTG GCGGACGCAG CAACATATTG AGGAACTTAA TGGAGCATCC 
TTATTTTTCC CTGATGCTTA CCGGCAATGG CTGGATAGCA TTTACGATGA TGCTGAAATG 
GATGAGCCAG AATGGGTCAT CAAAGGCATG GATAAGTTTG AAAGCGCTGA GTGTGAAAAG 
AGGTTCAAGG CTCGCAAGGT TCTGCAGTGG GCTGAAGAAT ATAGTTTGCA GGATAACGAT 
GAAACCATTC TTGCGGTAAC GAGGGATGGG GAAATGAGCC TGCCATTATT GCCTTATGTA 
CAAACGTCTT CAGGTAAACA ACTGCTCGAT GGCCAGGTCT ACGAGGACCT AAGTCATGAA 
CAGCAGTATG AGGCGTTAGC TCTTAATCGC GTCAATGTAC CCTTCACCTG GAAACGTAGT 
TTTTCTGAAG TAGTAGATGA AGATGGGTTA CTTTGGCTGG AAGGGAAACA GAATCAGGAT 
GGATGGATCT GGCAGGGTAA TAATATTGTT ATTACCTACA CTCGGGATGA AGGGATGACC 
AGAGTCATCC CTGCAAATCC CAAATAA 

 

Protein sequence

MEPFKYICHY WGKSSKSLTK GNDIHLLIYH CLDVAAVADC WWDQSVVLQN AFCRNEMLSK 
QRVKAWLLFF IALHDIGKFD IRFQYKSAES WLKLNPATPS LNGPSTQMCR KFNHGAAGLY 
WFNQDSLSEQ SPGDFFSFFD AAPHPYESWF PWVEAVTGHH GFILHSQDQD KSRWEMPASL 
ASYAAQDKQA REEWISVLEA LFLTPAGLSI NDIPPDCSSL LAGFCSLADW LGSWTTTDTF 
LFKEDAPSGI QALRTYFQDR QQDACRVLAL SGLVSNKRRY DGVHALLDNG YQPRQLQVLV 
DALPAAPGLT VIEAPTGSGK TETALAYAWK LIDQQLADSV IFALPTQATA NAMLSRMEAN 
ASRLFTSPNL ILAHGNSRFN HLFQSIKSRA FTEQGQEEAW VQCCQWLSQS NKKVFLGQIG 
VCTIDQVLIS VLPVKHRFIR GLGIGRSVLI VDEVHAYDTY MNGLLEAVLK AQADVGGSVI 
LLSATLPMKQ KQKLLDTYGL HTDPEENNSA YPLINWRGVN GAQRFDLLAH PEQLPPRFSI 
QPEPIYLADM LPDLTMLERM IAAANAGAQV CLICNLVDVA QVCYQRLKEL NNTQVDIDLF 
HARFTLNSRR EKENRVISNF GKNGKRNVGR ILVATQVVEQ SLDVDFDWLI TQHCPADLLF 
QRLGRLHRHH RKYRPAGFEI PLATVLLPDG EGYGRHEHIY SNVRVMWRTQ QHIEELNGAS 
LFFPDAYRQW LDSIYDDAEM DEPEWVIKGM DKFESAECEK RFKARKVLQW AEEYSLQDND 
ETILAVTRDG EMSLPLLPYV QTSSGKQLLD GQVYEDLSHE QQYEALALNR VNVPFTWKRS 
FSEVVDEDGL LWLEGKQNQD GWIWQGNNIV ITYTRDEGMT RVIPANPK