Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A2822 |
Symbol | emrB |
ID | 5595415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 2830166 |
End bp | 2831704 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640921938 |
Product | multidrug resistance protein B |
Protein accession | YP_001459455 |
Protein GI | 157162137 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 0.292864 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACAGC AAAAACCGCT GGAAGGCGCG CAACTGGTCA TTATGACGAT TGCGCTGTCA CTGGCGACAT TCATGCAGGT GCTGGACTCC ACCATTGCTA ACGTGGCGAT CCCCACTATC GCCGGGAATC TGGGCTCATC GCTCAGCCAG GGAACGTGGG TAATCACTTC TTTCGGGGTG GCGAATGCCA TCTCGATCCC GCTTACCGGC TGGCTGGCAA AGCGCGTCGG GGAAGTGAAA CTGTTCCTTT GGTCCACCAT CGCCTTTGCT ATTGCGTCGT GGGCGTGTGG TGTCTCCAGC AGCCTGAATA TGCTGATCTT CTTCCGCGTG ATTCAGGGGA TTGTCGCCGG GCCGTTGATC CCGCTTTCGC AAAGTCTATT GCTGAATAAC TACCCGCCAG CCAAACGCTC GATCGCGCTG GCGTTGTGGT CGATGACGGT GATTGTCGCG CCAATTTGCG GCCCGATCCT CGGCGGTTAT ATCAGCGATA ATTACCACTG GGGCTGGATA TTCTTCATCA ACGTGCCGAT TGGCGTGGCG GTGGTGTTGA TGACACTGCA AACTCTGCGC GGACGTGAAA CCCGCACCGA ACGGCGGCGG ATTGATGCCG TGGGGCTGGC ACTGCTGGTT ATTGGTATCG GCAGCCTGCA GATTATGCTC GACCGCGGTA AAGAGCTGGA CTGGTTTTCA TCACAGGAAA TTATCATCCT TACCGTGGTG GCGGTGGTGG CTATCTGCTT CCTGATTGTC TGGGAGCTGA CCGACGATAA CCCGATAGTC GATCTGTCGT TGTTTAAGTC GCGCAACTTC ACCATCGGCT GCTTGTGTAT CAGCCTCGCG TATATGCTCT ACTTCGGCGC TATTGTTCTG CTGCCGCAGT TGTTGCAGGA GGTCTACGGT TACACGGCGA CCTGGGCAGG TTTGGCCTCT GCGCCGGTAG GGATTATTCC GGTGATCCTG TCGCCGATTA TCGGCCGCTT CGCGCATAAA CTGGATATGC GGCGGCTGGT AACCTTCAGC TTTATTATGT ATGCCGTCTG CTTCTACTGG CGTGCCTATA CCTTTGAACC AGGTATGGAT TTTGGCGCGT CGGCCTGGCC GCAGTTTATC CAGGGGTTTG CGGTGGCCTG CTTCTTTATG CCGCTGACCA CCATTACGCT GTCTGGTTTG CCACCGGAAC GACTGGCGGC GGCATCGAGC CTCTCTAACT TTACGCGAAC GCTGGCGGGG TCTATCGGCA CGTCGATAAC CACGACCATG TGGACCAACC GCGAGTCGAT GCACCATGCG CAGTTGACTG AGTCGGTAAA CCCGTTCAAC CCGAATGCCC AGGCGATGTA CAGTCAACTG GAAGGGCTTG GGATGACGCA ACAGCAGGCA TCAGGCTGGA TTGCCCAGCA GATCACCAAT CAGGGGCTGA TTATTTCCGC CAATGAGATC TTCTGGATGT CAGCCGGGAT ATTCCTCGTC CTGCTGGGGC TGGTGTGGTT TGCTAAACCG CCATTTGGCG CAGGTGGCGG CGGAGGCGGT GCGCACTAA
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Protein sequence | MQQQKPLEGA QLVIMTIALS LATFMQVLDS TIANVAIPTI AGNLGSSLSQ GTWVITSFGV ANAISIPLTG WLAKRVGEVK LFLWSTIAFA IASWACGVSS SLNMLIFFRV IQGIVAGPLI PLSQSLLLNN YPPAKRSIAL ALWSMTVIVA PICGPILGGY ISDNYHWGWI FFINVPIGVA VVLMTLQTLR GRETRTERRR IDAVGLALLV IGIGSLQIML DRGKELDWFS SQEIIILTVV AVVAICFLIV WELTDDNPIV DLSLFKSRNF TIGCLCISLA YMLYFGAIVL LPQLLQEVYG YTATWAGLAS APVGIIPVIL SPIIGRFAHK LDMRRLVTFS FIMYAVCFYW RAYTFEPGMD FGASAWPQFI QGFAVACFFM PLTTITLSGL PPERLAAASS LSNFTRTLAG SIGTSITTTM WTNRESMHHA QLTESVNPFN PNAQAMYSQL EGLGMTQQQA SGWIAQQITN QGLIISANEI FWMSAGIFLV LLGLVWFAKP PFGAGGGGGG AH
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