Gene EcHS_A2813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A2813 
SymbolproV 
ID5595488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp2822258 
End bp2823460 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content49% 
IMG OID640921929 
Productglycine betaine transporter ATP-binding subunit 
Protein accessionYP_001459446 
Protein GI157162128 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4175] ABC-type proline/glycine betaine transport system, ATPase component 
TIGRFAM ID[TIGR01186] glycine betaine/L-proline transport ATP binding subunit 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATTA AATTAGAAAT TAAAAATCTT TATAAAATAT TTGGCGAGCA TCCACAGCGA 
GCGTTCAAAT ATATCGAACA AGGACTTTCA AAAGAACAAA TTCTGGAAAA AACTGGGCTA
TCGCTTGGCG TAAAAGACGC CAGTCTGGCC ATTGAAGAAG GCGAGATATT TGTCATCATG
GGATTATCCG GCTCGGGTAA ATCCACAATG GTACGTCTTC TCAATCGCCT GATTGAACCC
ACCCGCGGGC AAGTGCTGAT TGATGGTGTG GATATTGCCA AAATATCCGA CGCCGAACTC
CGTGAGGTGC GCAGAAAAAA GATTGCGATG GTCTTCCAGT CCTTTGCCTT AATGCCGCAT
ATGACCGTGC TGGACAATAC TGCGTTCGGT ATGGAATTGG CCAGAATTAA TGCCGAAGAA
CGCCGGGAAA AAGCCCTTGA TGCACTGCGT CAGGTCGGGC TGGAAAATTA TGCCCACAGC
TACCCGGATG AACTCTCTGG CGGGATGCGT CAACGTGTGG GATTAGCCCG CGCGTTAGCG
ATTAATCCGG ATATATTATT AATGGACGAA GCCTTCTCGG CGCTCGATCC ATTAATTCGC
ACCGAGATGC AGGATGAGCT GGTAAAATTA CAGGCGAAAC ATCAGCGCAC CATTGTCTTT
ATTTCCCACG ATCTTGATGA AGCCATGCGT ATTGGCGACC GAATTGCCAT TATGCAAAAT
GGTGAAGTGG TACAGGTCGG CACACCGGAT GAAATTCTCA ATAATCCGGC GAATGATTAT
GTCCGTACCT TCTTCCGTGG CGTTGATATT AGTCAGGTAT TCAGTGCGAA AGATATTGCC
CGCCGGACAC CGAATGGCTT AATTCGTAAA ACCCCTGGCT TCGGCCCACG TTCGGCACTG
AAATTATTGC AGGATGAAGA TCGCGAATAT GGCTACGTTA TCGAACGCGG TAATAAGTTT
GTCGGCGCAG TCTCCATCGA TTCGCTTAAA ACCGCGTTAA CGCAGCAGCA AGGTCTTGAT
GCGGCGCTGA TTGATGCGCC GTTAGCAGTC GATGCACAAA CGCCTCTTAG CGAGTTGCTC
TCTCATGTCG GACAGGCACC CTGTGCGGTG CCCGTGGTCG ACGAGGACCA ACAGTATGTC
GGCATCATTT CGAAAGGAAT GCTGCTGCGC GCTTTAGATC GTGAGGGGGT AAATAATGGC
TGA
 
Protein sequence
MAIKLEIKNL YKIFGEHPQR AFKYIEQGLS KEQILEKTGL SLGVKDASLA IEEGEIFVIM 
GLSGSGKSTM VRLLNRLIEP TRGQVLIDGV DIAKISDAEL REVRRKKIAM VFQSFALMPH
MTVLDNTAFG MELARINAEE RREKALDALR QVGLENYAHS YPDELSGGMR QRVGLARALA
INPDILLMDE AFSALDPLIR TEMQDELVKL QAKHQRTIVF ISHDLDEAMR IGDRIAIMQN
GEVVQVGTPD EILNNPANDY VRTFFRGVDI SQVFSAKDIA RRTPNGLIRK TPGFGPRSAL
KLLQDEDREY GYVIERGNKF VGAVSIDSLK TALTQQQGLD AALIDAPLAV DAQTPLSELL
SHVGQAPCAV PVVDEDQQYV GIISKGMLLR ALDREGVNNG