| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A2811 |
|---|
| Symbol | nrdE |
|---|
| ID | 5591324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 2818791 |
|---|
| End bp | 2820935 |
|---|
| Gene Length | 2145 bp |
|---|
| Protein Length | 714 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640921927 |
|---|
| Product | ribonucleotide-diphosphate reductase subunit alpha |
|---|
| Protein accession | YP_001459444 |
|---|
| Protein GI | 157162126 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCAACGA CAACCGCAGA ATGCCTGACG CAGGAAACGA TGGATTACCA CGCGCTGAAT
GCGATGCTTA ACCTCTACGA TAGCGCAGGT CGCATTCAGT TCGATAAAGA CCGCCAGGCC
GTTGACGCCT TTATTGCGAC GCATGTGCGT CCGAACAGTG TGACCTTCAG TAGCCAGCAG
CAGCGCCTGA ACTGGCTGGT CAACGAAGGT TACTATGATG AAAGCGTTCT TAATCGCTAC
TCTCGCGACT TTGTCATTAC GCTGTTTGCC CACGCACACA CCAGCGGTTT TCGTTTCCAG
ACATTCCTCG GGGCATGGAA GTTTTACACC AGCTATACGT TGAAGACATT CGACGGTAAA
CGTTATCTGG AAGATTTTGC CGATCGAGTC ACGATGGTGG CGCTGACGCT GGCACAAGGC
GATGAGACGC TGGCGTTGCA ACTGACAGAT GAAATGCTGT CAGGACGCTT TCAGCCAGCC
ACGCCAACAT TCCTCAACTG CGGTAAGCAG CAGCGCGGCG AACTGGTTTC CTGTTTTTTG
CTGCGTATTG AAGACAATAT GGAGTCGATT GGTCGGGCGG TAAATTCCGC ACTGCAACTG
TCGAAACGCG GCGGCGGCGT AGCATTTTTG CTGTCGAATC TGCGAGAAGC GGGCGCGCCA
ATTAAACGTA TTGAAAATCA ATCTTCTGGC GTAATTCCGG TGATGAAAAT GCTGGAAGAC
GCATTTTCCT ATGCCAACCA ACTCGGCGCT CGTCAGGGGG CTGGTGCAGT CTATTTACAT
GCTCATCATC CCGATATTCT GCGTTTTCTC GACACGAAAC GGGAAAATGC CGACGAAAAA
ATCCGCATTA AAACACTGTC GCTTGGCGTG GTGATCCCGG ATATCACTTT CCATCTGGCA
AAAGAGAATG CGCAGATGGC GCTGTTTTCG CCTTATGACG TAGAGCGAGT TTATGGCAAG
CCGTTTGCCG ATGTGGCCAT CAGCCAACAC TATGACGAAC TGGTTGCCGA TGAACGCATT
CGCAAAAAAT ACCTCAACGC CCGTGATTTC TTCCAGCGAC TGGCAGAAAT CCAGTTTGAG
TCCGGCTATC CCTACATCAT GTATGAAGAC ACGGTAAACC GTGCTAACCC TATCGCCGGG
CGCATAAATA TGAGTAATCT CTGCTCAGAA ATTTTGCAGG TTAACAGCGC CTCAGAGTAT
GACGAGAATC TCGACTATAC CCGCACAGGC CATGATATTT CCTGCAATTT AGGTTCGTTG
AATATTGCGC ACACCATGGA TTCCCCCGAT TTTGCCCGCA CGGTAGAGAC TGCCGTGCGC
GGTTTAACGG CAGTATCAGA TATGAGTCAT ATCCGCAGCG TGCCGTCCAT CGAAGCCGGA
AATGCCGCCT CGCACGCCAT CGGACTGGGG CAGATGAATT TACACGGCTA TCTGGCGCGA
GAAGGCATCG CTTATGGTTC GCCGGAAGCA CTGGATTTCA CCAATCTCTA TTTCTATGCC
ATCACCTGGC ATGCACTGCG TACCTCGATG TTGCTGGCAC GCGAACGCGG TGAAACCTTC
GCCGGGTTCA AACAGTCACG CTATGCCAGT GGTGAATATT TTAGCCAATA TCTGCAAGGG
AACTGGCAGC CGAAAACGGC GAAAGTTGGC GAACTGTTTA CCCGTAGCGG TATTACGTTA
CCTACCCGTG AGATGTGGGC GCAGCTGCGC GACGACGTGA TGCGCTACGG CATATACAAC
CAGAATCTTC AGGCGGTGCC GCCAACCGGT TCTATCTCTT ATATCAACCA TGCTACGTCG
AGTATTCATC CGATTGTGGC GAAAGTAGAG ATACGCAAAG AGGGCAAAAC AGGACGCGTT
TACTACCCTG CCCCGTTTAT GACTAACGAG AATCTGGCGC TGTATCAGGA CGCTTACGAA
ATTGGCGCAG AAAAGATCAT CGACACCTAC GCGGAAGCGA CTCGCCATGT CGATCAGGGG
CTGTCGCTGA CGCTTTTTTT CCCCGATACC GCCACCACTC GCGATATCAA CAAAGCGCAG
ATTTACGCCT GGCGCAAGGG TATCAAAACG CTCTATTACA TCCGCCTGCG TCAGATGGCG
CTGGAAGGCA CTGAAATTGA AGGCTGCGTC TCCTGTGCAC TTTAA
|
|---|
| Protein sequence | MATTTAECLT QETMDYHALN AMLNLYDSAG RIQFDKDRQA VDAFIATHVR PNSVTFSSQQ
QRLNWLVNEG YYDESVLNRY SRDFVITLFA HAHTSGFRFQ TFLGAWKFYT SYTLKTFDGK
RYLEDFADRV TMVALTLAQG DETLALQLTD EMLSGRFQPA TPTFLNCGKQ QRGELVSCFL
LRIEDNMESI GRAVNSALQL SKRGGGVAFL LSNLREAGAP IKRIENQSSG VIPVMKMLED
AFSYANQLGA RQGAGAVYLH AHHPDILRFL DTKRENADEK IRIKTLSLGV VIPDITFHLA
KENAQMALFS PYDVERVYGK PFADVAISQH YDELVADERI RKKYLNARDF FQRLAEIQFE
SGYPYIMYED TVNRANPIAG RINMSNLCSE ILQVNSASEY DENLDYTRTG HDISCNLGSL
NIAHTMDSPD FARTVETAVR GLTAVSDMSH IRSVPSIEAG NAASHAIGLG QMNLHGYLAR
EGIAYGSPEA LDFTNLYFYA ITWHALRTSM LLARERGETF AGFKQSRYAS GEYFSQYLQG
NWQPKTAKVG ELFTRSGITL PTREMWAQLR DDVMRYGIYN QNLQAVPPTG SISYINHATS
SIHPIVAKVE IRKEGKTGRV YYPAPFMTNE NLALYQDAYE IGAEKIIDTY AEATRHVDQG
LSLTLFFPDT ATTRDINKAQ IYAWRKGIKT LYYIRLRQMA LEGTEIEGCV SCAL
|
|---|
| |