Gene EcHS_A2799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A2799 
SymbolcsiR 
ID5591749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand+ 
Start bp2813118 
End bp2813780 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content54% 
IMG OID640921915 
ProductDNA-binding transcriptional regulator CsiR 
Protein accessionYP_001459432 
Protein GI157162114 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATTA CGTCTCTGGA TGGCTATCGC TGGCTGAAGA ACGATATTAT TCGCGGTAAT 
TTTCAACCGG ATGAAAAATT ACGAATGAGT TTGCTGACAT CGCGTTATGC ACTTGGCGTT 
GGGCCGTTAC GGGAAGCTCT TTCGCAACTG GTGGCGGAAC GGCTGGTCAC GGTGGTGAAT 
CAAAAAGGGT ATCGGGTGGC GTCTATGTCA GAGCAGGAGC TGCTCGATAT TTTCGACGCC 
CGCGCCAATA TGGAAGCGAT GCTGGTCAGT CTGGCGATTG CCCGCGGTGG CGATGAATGG 
GAGGCAGACG TTCTCGCAAA AGCGCATCTG CTGAGTAAGC TGGAGGCCTG TGACGCCAGC 
GAGAAAATGC TTGATGAGTG GGATCTGCGT CATCAGGCGT TTCATACAGC AATTGTGGCG 
GGCTGTGGTT CTCACTATTT GCTGCAAATG CGTGAACGGT TGTTTGATCT GGCGGCGCGC 
TATCGATTTA TCTGGCTGCG GCGAACGGTG CTTTCGGTAG AAATGCTGGA GGATAAACAC 
GATCAGCACC AGACCCTGAC TGCGGCGGTA CTGGCGCGAG ATACCGCGCG CGCCAGTGAG 
TTAATGCGCC AGCATTTACT GACGCCAATT CCCATTATCC AGCAGGCGAT GGCTGGCAAT 
TAA
 
Protein sequence
MTITSLDGYR WLKNDIIRGN FQPDEKLRMS LLTSRYALGV GPLREALSQL VAERLVTVVN 
QKGYRVASMS EQELLDIFDA RANMEAMLVS LAIARGGDEW EADVLAKAHL LSKLEACDAS 
EKMLDEWDLR HQAFHTAIVA GCGSHYLLQM RERLFDLAAR YRFIWLRRTV LSVEMLEDKH 
DQHQTLTAAV LARDTARASE LMRQHLLTPI PIIQQAMAGN