| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A2796 |
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| Symbol | gabD |
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| ID | 5593220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 2808717 |
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| End bp | 2810165 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640921912 |
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| Product | succinate-semialdehyde dehydrogenase I |
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| Protein accession | YP_001459429 |
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| Protein GI | 157162111 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 55 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTTA ACGACAGTAA ATTATTCCGC CAGCAGGCGT TGATTAACGG GGAATGGCTG
GACGCCAACA ATGGCGAGGT CATCGATGTC ACCAATCCGG CGAACGGCGA CAAGCTGGGT
AGCGTACCCA AAATGGGCGC TGATGAAACC CGCGCCGCTA TCGACGCCGC CAACCGCGCT
CTGCCCGCCT GGCGTGCGCT CACCGCCAAA GAACGCGCCA ACATTCTGCG CAACTGGTTC
AATTTGTTGA TGGAGCATCA GGACGATTTA GCGCGCCTGA TGACCCTAGA ACAGGGCAAA
CCGCTGGCTG AAGCGAAAGG CGAAATTAGC TACGCCGCCT CCTTTATTGA GTGGTTTGCT
GAAGAAGGCA AACGCATTTA TGGCGACACC ATTCCTGGTC ATCAGGCCGA TAAGCGCCTG
ATTGTTATCA AGCAGCCGAT TGGCGTCACC GCAGCTATCA CGCCGTGGAA CTTCCCGGCG
GCGATGATTA CCCGCAAAGC CGGTCCGGCG CTGGCGGCAG GCTGCACCAT GGTGCTGAAG
CCTGCCAGTC AGACGCCGTT CTCTGCGCTG GCGCTGGCGG AGCTGGCGAT TCGCGCGGGC
ATTCCGGCTG GGGTATTTAA CGTGGTCACC GGTTCGGCGG GCGCGGTGGG TAACGAACTG
ACCAGCAACC CGCTGGTGCG CAAGCTGTCG TTTACCGGTT CGACCGAAAT TGGCCGCCAG
TTAATGGAAC AGTGCGCGAA AGACATCAAA AAAGTGTCGC TGGAGCTGGG CGGCAACGCG
CCGTTTATCG TCTTTGACGA TGCCGACCTC GACAAAGCCG TGGAAGGTGC GCTGTCCTCG
AAATTCCGCA ACGCCGGGCA AACCTGCGTC TGCGCCAACC GTTTATACGT GCAGGACGGC
GTGTATGACC GCTTTGCCGA AAAATTGCAG CAGGCGGTGA GCAAATTGCA CATCGGCGAC
GGGCTGGAGA AAGGCGTCAC CATCGGGCCG CTGATCGATG AAAAAGCGGT AGCAAAAGTG
GAAGAGCATA TTGCCGATGC GCTGGAGAAA GGTGCGCGTG TGGTTTGCGG CGGTAAAGCG
GATGAACGCG GCGGCAACTT CTTCCAGCCG ACCATTCTGG TGGACGTTCC AGCCAACGCC
AAAGTGTCGA AAGAAGAGAC GTTCGGCCCC CTCGCCCCAC TGTTCCGTTT TAAAGATGAA
GCCGATGTGA TTGCGCAAGC CAATGACACC GAGTTTGGCC TTGCCGCCTA TTTCTACGCC
CGTGATTTAA GCCGCGTCTT CCGCGTGGGC GAAGCGCTGG AGTACGGCAT CGTCGGCATC
AATACCGGCA TCATTTCCAA TGAAGTGGCC CCGTTCGGCG GCATTAAAGC CTCGGGTCTG
GGTCGTGAAG GTTCGAAGTA TGGCATCGAA GATTACTTAG AAATCAAATA TATGTGCATC
GGTCTTTAA
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| Protein sequence | MKLNDSKLFR QQALINGEWL DANNGEVIDV TNPANGDKLG SVPKMGADET RAAIDAANRA
LPAWRALTAK ERANILRNWF NLLMEHQDDL ARLMTLEQGK PLAEAKGEIS YAASFIEWFA
EEGKRIYGDT IPGHQADKRL IVIKQPIGVT AAITPWNFPA AMITRKAGPA LAAGCTMVLK
PASQTPFSAL ALAELAIRAG IPAGVFNVVT GSAGAVGNEL TSNPLVRKLS FTGSTEIGRQ
LMEQCAKDIK KVSLELGGNA PFIVFDDADL DKAVEGALSS KFRNAGQTCV CANRLYVQDG
VYDRFAEKLQ QAVSKLHIGD GLEKGVTIGP LIDEKAVAKV EEHIADALEK GARVVCGGKA
DERGGNFFQP TILVDVPANA KVSKEETFGP LAPLFRFKDE ADVIAQANDT EFGLAAYFYA
RDLSRVFRVG EALEYGIVGI NTGIISNEVA PFGGIKASGL GREGSKYGIE DYLEIKYMCI
GL
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