Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A2766 |
Symbol | trmD |
ID | 5591700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 2784961 |
End bp | 2785728 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640921882 |
Product | tRNA (guanine-N(1)-)-methyltransferase |
Protein accession | YP_001459401 |
Protein GI | 157162083 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.00000177512 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGATTG GCATAATTAG CCTGTTTCCT GAAATGTTCC GCGCAATTAC CGATTACGGG GTAACTGGCC GGGCAGTTAA AAATGGCCTG CTGAGCATCC AGAGCTGGAG TCCTCGCGAC TTCACGCATG ACCGGCACCG TACCGTGGAC GATCGTCCTT ACGGCGGCGG ACCGGGGATG TTAATGATGG TGCAACCCTT GCGGGACGCC ATTCATGCAG CAAAAGCCGC GGCGGGTGAA GGCGCAAAGG TGATTTATCT GTCACCACAG GGACGCAAGC TTGATCAAGC GGGCGTCAGC GAACTGGCAA CGAATCAAAA ATTGATTCTG GTGTGCGGTC GCTACGAAGG TATAGATGAG CGCGTGATCC AAACCGAAAT TGACGAAGAA TGGTCAATCG GCGATTACGT TCTCAGTGGT GGTGAGTTAC CAGCAATGAC GCTGATTGAC TCCGTTTCCC GGTTTATTCC GGGAGTACTG GGACATGAAG CCTCGGCAAC GGAAGATTCC TTTGCTGAAG GATTGCTGGA TTGCCCGCAC TATACGCGGC CTGAGGTGTT AGAAGGGATG GAAGTTCCGC CAGTGTTACT GTCGGGCAAC CATGCCGAGA TACGTCGCTG GCGTTTGAAA CAGTCGCTGG GCCGTACCTG GCTTAGAAGA CCTGAACTTC TGGAAAACCT GGCTCTGACT GAAGAGCAAG CAAGGTTGCT GGCGGAGTTC AAAACGGAAC ACGCACAACA GCAACATAAA CATGATGGGA TGGCGTAA
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Protein sequence | MWIGIISLFP EMFRAITDYG VTGRAVKNGL LSIQSWSPRD FTHDRHRTVD DRPYGGGPGM LMMVQPLRDA IHAAKAAAGE GAKVIYLSPQ GRKLDQAGVS ELATNQKLIL VCGRYEGIDE RVIQTEIDEE WSIGDYVLSG GELPAMTLID SVSRFIPGVL GHEASATEDS FAEGLLDCPH YTRPEVLEGM EVPPVLLSGN HAEIRRWRLK QSLGRTWLRR PELLENLALT EEQARLLAEF KTEHAQQQHK HDGMA
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