Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A2734 |
Symbol | |
ID | 5591009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 2754054 |
End bp | 2754935 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640921853 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001459376 |
Protein GI | 157162058 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.0381749 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTGC GCCGTTTTAT TACGCTTAAA ACCGTGGTGG AAGAGGGTTC CTTTTTGCGA GCTTCGCAAA AATTGTGCTG TACACAATCG ACGGTGACTT TTCATATTCA GCAGCTTGAG CAGGAGTTTT CAGTCCAGTT ATTTGAGAAA ATTGGCCGAC GGATGTGCCT TACCCGCGAA GGAAAAAAGT TGCTGCCGCA CATTTATGAA CTTACCCGAG TGATGGATAC GCTTCGTGAG GCTGCCAAAA AGGAGTCAGA TCCGGACGGG GAACTACGCG TTGTTTCGGG CGAAACGTTG CTCTCTTACC GAATGCCGCA GGTGTTGCAG CGTTTTCGGC AACGCGCCCC AAAAGTGCGT TTATCGTTGC AGTCGCTGAA CTGTTACGTG ATCCGTGATG CGCTACTGAA TGATGAGGCC GATGTTGGCG TCTTTTATCG TGTAGGGAAT GATGATGCTC TGAATCGACG AGAGTTGGGT GAACAATCAC TGGTGCTGGT GGCTTCACCG CAAATTGCAG ATGTCGATTT TACTGAGCCG GGAAGACATA ACGCCTGTAG CTTTATTATC AACGAACCGC AATGTGTCTT CCGGCAGATA TTTGAGAGCA CGCTGCGTCA GCGGCGGATC ACGGTGGAAA ACACCATTGA GCTTATAAGT ATCGAAAGCA TCAAGCGTTG TGTCGCGGCG AATATCGGGG TCAGCTACCT ACCGCGCTTT GCGGTGGCAA AAGAGTTGGA GTGCGGAGAA TTAATTGAAT TGCCTTTTGG CGAACAGTCG CAGACCATTA CGGCCATGTG CGCACATCAT GCTGGAAAAG CGGTTAGCCC GGCGATGCAC ACTTTTATTC AGTGTGTTGA AGAGAGTTTT GTGGCTGGAT AA
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Protein sequence | MDLRRFITLK TVVEEGSFLR ASQKLCCTQS TVTFHIQQLE QEFSVQLFEK IGRRMCLTRE GKKLLPHIYE LTRVMDTLRE AAKKESDPDG ELRVVSGETL LSYRMPQVLQ RFRQRAPKVR LSLQSLNCYV IRDALLNDEA DVGVFYRVGN DDALNRRELG EQSLVLVASP QIADVDFTEP GRHNACSFII NEPQCVFRQI FESTLRQRRI TVENTIELIS IESIKRCVAA NIGVSYLPRF AVAKELECGE LIELPFGEQS QTITAMCAHH AGKAVSPAMH TFIQCVEESF VAG
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