| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A2711 |
|---|
| Symbol | |
|---|
| ID | 5595444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 2734136 |
|---|
| End bp | 2735692 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640921830 |
|---|
| Product | putative transglycosylase |
|---|
| Protein accession | YP_001459353 |
|---|
| Protein GI | 157162035 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAAAT TAAAGATTAA TTATCTGTTC ATCGGCATTC TGGCACTGCT GCTCGCGGTC
GCTCTCTGGC CATCCATTCC CTGGTTTGGT AAAGCCGACA ACCGTATCGC CGCCATTCAA
GCGCGGGGAG AGTTGCGTGT GAGCACCATT CATACTCCCC TGACTTATAA CGAAATCAAC
GGGAAACCTT TTGGCCTGGA TTACGAACTG GCGAAACAGT TTGCCGATTA CCTCGGCGTA
AAACTGAAAG TGACCGTGCG GCAGAATATC AGCCAGCTGT TTGACGACCT CGATAATGGT
AACGCCGACC TGCTGGCGGC AGGACTGGTC TATAACAGTG AGCGGGTAAA AAATTATCAG
CCTGGCCCTA CCTATTATTC CGTGTCACAA CAACTGGTTT ATAAAGTGGG TCAGTATCGC
CCACGTACGC TGGGCAACCT GACGGCGGAG CAACTCACCG TTGCACCGGG TCATGTGGTG
GTTAACGATC TCCAGACCCT GAAAGAAACA AAATTCCCGG AATTAAGCTG GAAGGTAGAC
GACAAAAAAG GCTCTGCGGA ATTAATGGAA GATGTCATCG AAGGAAAACT CGATTACACC
ATTGCTGATT CTGTCGCCAT CAGCCTGTTT CAGCGCGTTC ACCCGGAGCT CGCCGTAGCG
CTCGATATCA CCGATGAACA ACCGGTGACT TGGTTTAGCC CGTTAGATGG CGATAATACC
CTTTCCGCCG CCCTGCTCGA CTTCTTCAAC GAAATGAATG AAGACGGTAC GCTGGCACGC
ATTGAAGAGA AATACCTGGG GCATGGCGAT GATTTTGATT ACGTCGATAC GCGCACATTT
TTACGCGCCG TCGATGCGGT ACTGCCGCAG TTAAAGCCCC TGTTTGAGAA ATACGCCGAA
GAAATTGACT GGCGTTTGCT GGCCGCTATT GCTTATCAGG AATCGCACTG GGATGCACAG
GCCACTTCAC CGACGGGTGT GCGCGGCATG ATGATGTTAA CCAAAAATAC CGCGCAAAGC
CTCGGCATTA CGGATCGTAC CGATGCCGAA CAGAGCATTA GCGGTGGCGT GCGTTATTTG
CAGGATATGA TGAGTAAAGT GCCGGAAAGT GTGCCGGAGA ACGAACGGAT CTGGTTTGCC
CTCGCTGCGT ACAATATGGG CTATGCGCAT ATGCTGGATG CCCGCGCCCT GACGGCAAAA
ACCAAAGGGA ATCCTGACAG TTGGGCTGAC GTAAAACAGC GTCTGCCTTT ACTTAGCCAG
AAACCCTATT ACAGCAAGCT GACTTACGGC TACGCTCGTG GGCATGAAGC CTACGCTTAT
GTCGAAAATA TTCGTAAGTA TCAGATTAGC CTGGTGGGTT ATCTGCAAGA GAAAGAGAAG
CAGGCTACAG AAGCGGCGAT GCAACTGGCG CAGGATTATC CGGCGGTATC GCCTACGGAG
TTGGGCAAAG AGAAATTTCC TTTTCTCTCG TTTCTTTCCC AGTCGTCATC AAACTATTTG
ACCCATTCTC CCTCTCTGCT GTTTTCCAGG AAAGGGAGTG AAGAGAAACA AAATTAA
|
|---|
| Protein sequence | MKKLKINYLF IGILALLLAV ALWPSIPWFG KADNRIAAIQ ARGELRVSTI HTPLTYNEIN
GKPFGLDYEL AKQFADYLGV KLKVTVRQNI SQLFDDLDNG NADLLAAGLV YNSERVKNYQ
PGPTYYSVSQ QLVYKVGQYR PRTLGNLTAE QLTVAPGHVV VNDLQTLKET KFPELSWKVD
DKKGSAELME DVIEGKLDYT IADSVAISLF QRVHPELAVA LDITDEQPVT WFSPLDGDNT
LSAALLDFFN EMNEDGTLAR IEEKYLGHGD DFDYVDTRTF LRAVDAVLPQ LKPLFEKYAE
EIDWRLLAAI AYQESHWDAQ ATSPTGVRGM MMLTKNTAQS LGITDRTDAE QSISGGVRYL
QDMMSKVPES VPENERIWFA LAAYNMGYAH MLDARALTAK TKGNPDSWAD VKQRLPLLSQ
KPYYSKLTYG YARGHEAYAY VENIRKYQIS LVGYLQEKEK QATEAAMQLA QDYPAVSPTE
LGKEKFPFLS FLSQSSSNYL THSPSLLFSR KGSEEKQN
|
|---|
| |