| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A2704 |
|---|
| Symbol | glyA |
|---|
| ID | 5592326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 2722588 |
|---|
| End bp | 2723841 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640921822 |
|---|
| Product | serine hydroxymethyltransferase |
|---|
| Protein accession | YP_001459346 |
|---|
| Protein GI | 157162028 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 57 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAGC GTGAAATGAA CATTGCCGAT TATGATGCCG AACTGTGGCA GGCTATGGAG
CAGGAAAAAG TACGTCAGGA AGAGCACATC GAACTGATCG CCTCCGAAAA CTACACCAGC
CCGCGCGTAA TGCAGGCGCA GGGTTCTCAG CTGACCAACA AATATGCTGA AGGTTATCCG
GGCAAACGCT ACTACGGCGG TTGCGAGTAT GTTGATATCG TTGAACAACT GGCGATCGAT
CGTGCGAAAG AACTGTTCGG CGCTGACTAC GCTAACGTTC AGCCGCACTC CGGCTCCCAG
GCTAACTTTG CGGTCTACAC CGCGCTGCTG GAACCAGGTG ATACCGTTCT GGGTATGAAC
CTGGCGCATG GCGGTCACCT GACTCACGGT TCTCCGGTTA ACTTCTCCGG TAAACTGTAC
AACATCGTTC CTTACGGTAT CGATGCTACC GGTCATATCG ACTACGCCGA TCTGGAAAAA
CAAGCCAAAG AACACAAGCC GAAAATGATT ATCGGTGGTT TCTCTGCATA TTCCGGCGTG
GTGGACTGGG CGAAAATGCG TGAAATCGCT GACAGCATCG GTGCTTACCT GTTCGTTGAT
ATGGCGCACG TTGCGGGCCT GGTTGCTGCT GGCGTCTACC CGAACCCGGT TCCTCATGCT
CACGTTGTTA CTACCACCAC TCACAAAACC CTGGCGGGTC CGCGCGGCGG CCTGATCCTG
GCGAAAGGTG GTAGCGAAGA GCTGTACAAA AAACTGAACT CTGCCGTTTT CCCTGGTGGT
CAGGGCGGTC CGTTGATGCA CGTAATCGCC GGTAAAGCGG TTGCTCTGAA AGAAGCGATG
GAGCCTGAGT TCAAAACTTA CCAGCAGCAG GTCGCTAAAA ACGCTAAAGC GATGGTAGAA
GTGTTCCTGG AACGCGGCTA CAAAGTGGTT TCCGGCGGCA CTGATAACCA CCTGTTCCTG
GTTGATCTGG TTGATAAAAA CCTGACCGGT AAAGAAGCAG ACGCCGCTCT GGGCCGTGCT
AACATCACCG TCAACAAAAA CAGCGTACCG AACGATCCGA AGAGCCCGTT TGTGACCTCC
GGTATTCGTG TAGGTACTCC GGCGATTACC CGTCGCGGCT TTAAAGAAGC CGAAGCGAAA
GAACTGGCTG GCTGGATGTG TGACGTGCTG GACAGCATCA ATGATGAAGC CGTTATCGAG
CGCATCAAAG GTAAAGTTCT CGACATCTGC GCACGTTACC CGGTTTACGC ATAA
|
|---|
| Protein sequence | MLKREMNIAD YDAELWQAME QEKVRQEEHI ELIASENYTS PRVMQAQGSQ LTNKYAEGYP
GKRYYGGCEY VDIVEQLAID RAKELFGADY ANVQPHSGSQ ANFAVYTALL EPGDTVLGMN
LAHGGHLTHG SPVNFSGKLY NIVPYGIDAT GHIDYADLEK QAKEHKPKMI IGGFSAYSGV
VDWAKMREIA DSIGAYLFVD MAHVAGLVAA GVYPNPVPHA HVVTTTTHKT LAGPRGGLIL
AKGGSEELYK KLNSAVFPGG QGGPLMHVIA GKAVALKEAM EPEFKTYQQQ VAKNAKAMVE
VFLERGYKVV SGGTDNHLFL VDLVDKNLTG KEADAALGRA NITVNKNSVP NDPKSPFVTS
GIRVGTPAIT RRGFKEAEAK ELAGWMCDVL DSINDEAVIE RIKGKVLDIC ARYPVYA
|
|---|
| |