Gene EcHS_A2702 details

Gene Information

• Locus tag: EcHS_A2702
• ID: 5594778
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: -
• Start bp: 2717798
• End bp: 2721172
• Gene Length: 3375 bp
• Protein Length: 1124 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 640921820
• Product: TPR repeat-containing protein
• Protein accession: YP_001459344
• Protein GI: 157162026

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCGTGATT ATTCCGCGAA AACATTGCCA GATTGTTCAA TACACTGCCA CAAATCTTTT 
AATTCAGTAT GTCTTGTTAA TATTGAGGGC ACCATGACTC CAGTAAAAGT GTGGCAAGAG 
CGCGTTGAGA TCCCGACCTA TGAAACCGGG CCGCAGGATA TACATCCCAT GTTCCTGGAA 
AATCGCGTTT ATCAGGGATC GTCCGGCGCG GTTTATCCCT ATGGCGTGAC CGATACGCTG 
AGCGAGCAGA AAACCCTGAA ATCCTGGCAG GCGGTGTGGC TGGAAAACGA CTACATCAAA 
GTGATGATCC TGCCGGAACT GGGCGGTCGT GTGCATCGCG CATGGGATAA AGTGAAACAA 
CGCGATTTTG TTTATCACAA TGAAGTCATT AAACCTGCGC TGGTGGGGCT GCTGGGACCG 
TGGATCTCCG GTGGGATTGA GTTTAACTGG CCGCAACACC ATCGCCCGAC CACCTTTATG 
CCCGTTGATT TCACCCTCGA AGCCCATGAA GACGGCGCAC AGACGGTGTG GGTCGGCGAA 
ACGGAGCCGA TGCATGGTTT ACAGGTGATG ACAGGTTTCA CCCTGCGCCC TGACCGGGCG 
GCGCTGGAAA TCGCCAGCCG CGTCTATAAC GGCAACGCCA CGCCGCGTCA TTTCTTGTGG 
TGGGCCAACC CGGCAGTGAA AGGGGGGGAA GGGCATCAGA GCGTTTTCCC GCCGGATGTA 
ACGGCGGTGT TTGATCACGG CAAACGGGCC GTCTCCGCTT TCCCCATCGC CACCGGCACT 
TACTACAAAG TGGACTACTC CGCTGGAGTG GACATTTCTC GCTATAAAAA TGTGCCCGTT 
CCAACCTCAT ATATGGCTGA AAAATCACAG TACGATTTTG TTGGCGCGTG GTGTCACGAT 
GAAGATGGCG GTTTGCTGCA CGTTGCCAAC CACCATATTG CGCCAGGTAA AAAACAGTGG 
AGTTGGGGAC ACAGTGAATT TGGCCAGGCG TGGGACAAGA GCCTGACCGA CAATAACGGC 
CCGTATATCG AACTGATGAC CGGTATTTTT GCCGATAACC AGCCTGATTT TACCTGGCTT 
GATGCTTACG AAGAGAAGCG TTTCGAGCAG TATTTCCTGC CTTATCATTC TCTGGGCATG 
GTGCAAAATG CCTCCCGCGA TGCGGTGATA AAACTCCAGC GTAGTGAGCG GGGGATTGAG 
TGGGGGCTGT ATGCCATCTC TCCGTTGAAC GGATACCGCC TGGCGATCCG CGAAATCGGC 
AAATGCAACG CGTTACTTGA TGATGCCGTG GCACTGATGC CTGCGACCGC CATCCAGGGC 
GTGTTGCACG GTATCAATCC TGAAAGGCTG ACCATTGAGC TCTCCGATGC CGACGGCAAT 
ATTGTACTGA GTTATCAGGA ACATCAGGCG CAAGAGTTGC CGTTGCCGGA CGTCGCCAAA 
GCGCCACTGG CAGCACAAGA CATTACCAGT ACAGATGAAG CCTGGTTTAT CGGTCAGCAT 
CTGGAGCAAT ATCATCACGC CAGCCGTTCA CCGTTCGATT ACTACCTGCG CGGCGTGGCG 
CTGGATCCGC TGGATTACCG CTGTAACCTG GCGCTGGCGA TGCTGGAATA TAACCGTGCC 
GATTTCCCGC AAGCGGTGGC GTATGCCACT CAGGCTCTGA AACGCGCACA TGCGCTGAAC 
AAAAATCCGC AGTGCGGACA GGCGAGTTTG ATTCGCGCCA GTGCTTACGA ACGTCAGGGA 
CAATATCAAC AAGCCGAAGA GGATTTCTGG CGGGCGGTCT GGAGCGGCAA CAGCAAAGCC 
GGTGGCTATT ATGGCCTGGC ACGACTGGCT GCGCGTAATG GTAACTTCGA CGCGGGTCTG 
GATTTTTGCC AACAAAGTCT TCGCGCCTGC CCAACCAATC AGGAAGTGCT TTGCCTGCAT 
AACCTGCTGC TGGTGTTAAG TGGTCGTCAG GACAACGCGC GTTTGCAGCG CGAGAAACTG 
CTGCGCGATT ATCCGCTGAA CGCCACTCTG TGGTGGCTGA ACTGGTTCGA TGGTCGTAGC 
GAATCAGCCC TCGCGCAGTG GCGCGGTCTG TGTCAGGGAC GCGACGTTAA CGCTCTGATG 
ACCGCCGGGC AACTGATTAA CTGGGGAATG CCCACCCTGG CGGCAGAGAT GCTGAACGCA 
CTGGACTGCC AGCGCACGCT GCCGCTTTAC CTGCAAGCCA GCTTGCTGCC GAAAGCCGAA 
CGTGGCGAAC TGGTCGCAAA AGCCATTGAT GTCTTCCCGC AGTTTGTCCG TTTCCCGAAT 
ACGCTGGAAG AAGTGGCGGC GCTGGAGAGT ATTGAAGAGT GCTGGTTTGC TCGCCATTTA 
CTGGCTTGCT TCTACTACAA CAAACGTAGC TACAACAAAG CCATTGCCTT TTGGCAACGT 
TGCGTAGAGA TGTCGCCGGA GTTTGACGAC GGCTGGCGCG GGTTAGCGAT CCATGCGTGG 
AATAAGCAAC ACGATTATGA GCTGACCGCG CGTTATCTTG ATAATGCTTA TCAGCTTGCG 
CCGCAGGATG CACGTCTGCT TTTCGAACGG GATTTGCTTG ATAAGTTAAG TGGAGCCACA 
CCGGAGAAAC GACTGGCGCG TCTGGAAAAT AATCAGGAAA TTGCGCTGAA ACGCGACGAC 
ATGACCGCAG AACTGCTCAA TTTGTGGCAT CTCACGGGTC AGGCAGACAA AGCGGCGGAC 
ATTCTCGCCA CGCGTAAATT CCACCCGTGG GAAGGCGGGG AAGGGAAGGT CACCAGTCAG 
TTTATCCTCA ACCAGTTATT ACGCGCCTGG CAGCATCTTG ATGCCAGAGA GCCGCAGCAG 
GCCAGCGAAC TGCTTCATGC CGCGCTGCAT TATCCGGAGA ATTTAAGCGA AGGCCGTTTA 
CCGGGGCAAA CTGATAACGA CATCTGGTTC TGGCAGGCGA TATGCGCCAA CGCGCAGGGC 
GATGAAACTG AAGCGATGCG TTGTTTACGT CTGGCGGCGA CCGGCGATCG CACCATTAAC 
ATCCACAGTT ATTACAACGA TCAGCCGGTT GATTATCTCT TCTGGCAAGG AATGGCGCTG 
CGACTGCTGG GTGAACAGCA AACCGCACAG CAACTGTTTA GTGAAATGAA ACAGTGGGCG 
CAAGAGATGG CGAAAACCAG TATTGAGGCG GATTTCTTTG CTGTTTCACA ACCTGACCTG 
TTGTCGCTGT ATGGCGATTT ACAACAGCAG CATAAAGAAA AATGCCTGAT GGTGGCGATG 
CTGGCGTCCG CGGGACTCGG GGAGGTTGCG CAATATGAAT CTGCTCGCGC TGAATTGACG 
GCGATTAATC CGGCCTGGCC GAAAGCGGCA TTATTCACCA CCGTGATGCC TTTTATTTTT 
AACTACGTTC ACTAA 

 

Protein sequence

MRDYSAKTLP DCSIHCHKSF NSVCLVNIEG TMTPVKVWQE RVEIPTYETG PQDIHPMFLE 
NRVYQGSSGA VYPYGVTDTL SEQKTLKSWQ AVWLENDYIK VMILPELGGR VHRAWDKVKQ 
RDFVYHNEVI KPALVGLLGP WISGGIEFNW PQHHRPTTFM PVDFTLEAHE DGAQTVWVGE 
TEPMHGLQVM TGFTLRPDRA ALEIASRVYN GNATPRHFLW WANPAVKGGE GHQSVFPPDV 
TAVFDHGKRA VSAFPIATGT YYKVDYSAGV DISRYKNVPV PTSYMAEKSQ YDFVGAWCHD 
EDGGLLHVAN HHIAPGKKQW SWGHSEFGQA WDKSLTDNNG PYIELMTGIF ADNQPDFTWL 
DAYEEKRFEQ YFLPYHSLGM VQNASRDAVI KLQRSERGIE WGLYAISPLN GYRLAIREIG 
KCNALLDDAV ALMPATAIQG VLHGINPERL TIELSDADGN IVLSYQEHQA QELPLPDVAK 
APLAAQDITS TDEAWFIGQH LEQYHHASRS PFDYYLRGVA LDPLDYRCNL ALAMLEYNRA 
DFPQAVAYAT QALKRAHALN KNPQCGQASL IRASAYERQG QYQQAEEDFW RAVWSGNSKA 
GGYYGLARLA ARNGNFDAGL DFCQQSLRAC PTNQEVLCLH NLLLVLSGRQ DNARLQREKL 
LRDYPLNATL WWLNWFDGRS ESALAQWRGL CQGRDVNALM TAGQLINWGM PTLAAEMLNA 
LDCQRTLPLY LQASLLPKAE RGELVAKAID VFPQFVRFPN TLEEVAALES IEECWFARHL 
LACFYYNKRS YNKAIAFWQR CVEMSPEFDD GWRGLAIHAW NKQHDYELTA RYLDNAYQLA 
PQDARLLFER DLLDKLSGAT PEKRLARLEN NQEIALKRDD MTAELLNLWH LTGQADKAAD 
ILATRKFHPW EGGEGKVTSQ FILNQLLRAW QHLDAREPQQ ASELLHAALH YPENLSEGRL 
PGQTDNDIWF WQAICANAQG DETEAMRCLR LAATGDRTIN IHSYYNDQPV DYLFWQGMAL 
RLLGEQQTAQ QLFSEMKQWA QEMAKTSIEA DFFAVSQPDL LSLYGDLQQQ HKEKCLMVAM 
LASAGLGEVA QYESARAELT AINPAWPKAA LFTTVMPFIF NYVH