| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A2599 |
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| Symbol | acrD |
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| ID | 5591188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 2609502 |
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| End bp | 2612615 |
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| Gene Length | 3114 bp |
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| Protein Length | 1037 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640921720 |
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| Product | aminoglycoside/multidrug efflux system |
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| Protein accession | YP_001459247 |
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| Protein GI | 157161929 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAATT TCTTTATTGA TCGCCCCATT TTTGCCTGGG TGCTGGCAAT CCTGTTGTGT
CTGACAGGTA CCCTGGCGAT TTTCTCATTG CCCGTTGAAC AATACCCCGA TCTCGCGCCA
CCGAATGTGC GAGTGACCGC TAACTATCCC GGCGCATCGG CCCAGACGCT GGAAAACACC
GTGACCCAGG TTATCGAGCA AAATATGACC GGCCTCGATA ATCTCATGTA TATGTCATCT
CAGAGCAGTG GCACCGGTCA GGCATCTGTC ACTTTAAGTT TTAAAGCAGG CACCGATCCG
GACGAAGCCG TGCAGCAAGT ACAAAACCAG CTGCAATCAG CCATGCGAAA GTTACCGCAG
GCGGTGCAAA ATCAGGGCGT GACGGTGCGT AAAACCGGCG ATACCAACAT TCTGACCATT
GCCTTCGTCT CTACCGATGG TTCGATGGAT AAACAGGATA TTGCTGATTA TGTTGCCAGT
AATATTCAGG ACCCGTTAAG CCGCGTGAAT GGCGTCGGGG ATATCGATGC CTATGGTTCG
CAATATTCCA TGCGTATCTG GCTGGACCCG GCGAAACTCA ACAGTTTCCA GATGACGGCT
AAAGATGTCA CTGATGCCAT TGAGTCACAG AACGCGCAGA TTGCGGTTGG GCAACTTGGT
GGTACACCTT CCGTCGATAA GCAGGCGCTC AACGCCACCA TTAACGCCCA GTCACTGCTG
CAAACACCAG AACAGTTCCG CGATATCACC TTGCGGGTCA ATCAGGACGG CTCAGAGGTA
AGGCTGGGCG ATGTCGCCAC CGTCGAAATG GGGGCGGAGA AATACGATTA TCTTAGCCGC
TTCAATGGTA AGCCAGCCTC CGGGCTGGGG GTAAAACTGG CCTCCGGCGC TAACGAAATG
GCGACAGCGG AGCTGGTGCT CAATCGTCTC GACGAGCTGG CGCAGTATTT CCCGCATGGA
CTGGAATACA AGGTGGCGTA TGAAACCACC TCGTTTGTTA AAGCCTCCAT TGAAGACGTG
GTGAAAACGC TGCTGGAAGC TATCGCTCTG GTTTTCCTCG TTATGTATCT GTTCCTGCAA
AACTTCCGCG CCACGCTGAT ACCCACTATC GCCGTGCCGG TGGTGTTGAT GGGAACCTTC
TCCGTACTTT ACGCCTTCGG TTACAGCGTC AACACCTTAA CCATGTTCGC GATGGTGCTG
GCGATCGGTC TGCTGGTGGA TGACGCCATC GTGGTGGTGG AAAACGTCGA ACGTATTATG
AGTGAGGAAG GACTCACTCC TCGCGAAGCC ACACGTAAAT CGATGGGGCA GATCCAGGGG
GCACTGGTCG GGATTGCGAT GGTGCTTTCG GCGGTATTTG TACCAATGGC CTTCTTCGGC
GGCATCACCG GTGCCATCTA TCGCCAGTTC TCTATTACCA TTGTTGCGGC GATGGTGCTG
TCAGTACTGG TAGCGATGAT CCTCACTCCG GCTCTGTGTG CCACACTACT TAAGCCACTG
AAAAAAGGTG AGCATCACGG GCAAAAAGGC TTTTTTGCCT GGTTTAACCA GATGTTTAAC
CGCAACGCCG AACGCTACGA AAAAGGGGTG GCGAAAATTC TCCACCGCAG CCTGCGCTGG
ATTGTGATTT ATGTCCTGCT GCTTGGCGGC ATGGTGTTCC TGTTCCTGCG TTTGCCGACG
TCGTTCTTAC CGCTGGAAGA CCGTGGCATG TTTACTACCT CGGTACAATT GCCCAGCGGT
TCAACCCAAC AACAGACCCT GAAAGTCGTT GAGCAAATCG AGAAATATTA CTTCACCCAT
GAAAAAGACA ACATCATGTC GGTGTTTGCC ACTGTTGGTT CTGGCCCTGG GGGTAACGGG
CAAAACGTGG CGCGAATGTT TATCCGCCTG AAAGACTGGA GCGAACGCGA CAGTAAGACC
GGCACCTCGT TTGCCATTAT CGAGCGTGCA ACAAAGGCGT TTAACCAAAT TAAAGAAGCT
CGCGTTATCG CCAGCAGCCC GCCAGCAATT AGCGGTCTTG GTAGTTCTGC AGGTTTTGAT
ATGGAGTTGC AGGACCACGC TGGAGCAGGT CACGATGCGC TGATGGCAGC ACGTAACCAG
TTGCTGGCGC TGGCGGCGGA AAACCCGGAG CTAACCCGTG TGCGCCATAA CGGCCTCGAT
GACAGTCCGC AGTTGCAGAT TGATATCGAC CAGCGTAAAG CTCAGGCGCT GGGCGTTGCT
ATCGACGATA TTAACGACAC ACTGCAAACC GCCTGGGGTT CGAGCTATGT GAATGACTTT
ATGGATCGCG GTCGCGTGAA GAAAGTCTAT GTGCAGGCAG CTGCGCCGTA TCGCATGCTG
CCAGATGACA TCAATCTCTG GTATGTCCGA AATAAAGATG GCGGCATGGT GCCCTTCTCT
GCTTTCGCGA CCTCACGCTG GGAGACAGGC TCACCGCGTC TGGAACGCTA TAACGGTTAT
TCTGCGGTTG AGATTGTTGG GGAAGCCGCA CCGGGGGTCA GTACCGGTAC GACGATGGAT
ATTATGGAAT CGTTAGTGAA GCAGTTGCCA AACGGCTTTG GTCTGGAGTG GACGGCGATG
TCGTATCAGG AGCGGCTTTC CGGCGCGCAG GCTCCGGCGC TGTACGCTAT TTCCTTGCTG
GTGGTATTCC TGTGTCTGGC TGCATTGTAT GAAAGCTGGT CGGTACCGTT CTCGGTAATG
CTGGTCGTGC CGCTGGGGGT TATCGGCGCG CTGCTGGCAA CCTGGATGCG GGGGCTGGAA
AACGACGTTT ACTTCCAGGT GGGCCTGTTA ACGGTCATTG GTTTATCGGC GAAAAACGCC
ATCCTGATCG TCGAGTTTGC TAACGAGATG AACCAAAAAG GCCACGACCT GTTTGAAGCG
ACGCTCCACG CCTGCCGTCA GCGTTTACGC CCGATTCTGA TGACCTCGCT GGCATTTATC
TTCGGCGTAT TGCCAATGGC AACCAGCACG GGTGCCGGTT CCGGTGGTCA GCATGCGGTG
GGTACTGGCG TAATGGGCGG GATGATTTCG GCTACTATTC TGGCTATTTA CTTCGTGCCG
CTGTTCTTTG TGCTGGTGCG CCGCCGCTTC CCGCTGAAGC CGCGCCCGGA ATAA
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| Protein sequence | MANFFIDRPI FAWVLAILLC LTGTLAIFSL PVEQYPDLAP PNVRVTANYP GASAQTLENT
VTQVIEQNMT GLDNLMYMSS QSSGTGQASV TLSFKAGTDP DEAVQQVQNQ LQSAMRKLPQ
AVQNQGVTVR KTGDTNILTI AFVSTDGSMD KQDIADYVAS NIQDPLSRVN GVGDIDAYGS
QYSMRIWLDP AKLNSFQMTA KDVTDAIESQ NAQIAVGQLG GTPSVDKQAL NATINAQSLL
QTPEQFRDIT LRVNQDGSEV RLGDVATVEM GAEKYDYLSR FNGKPASGLG VKLASGANEM
ATAELVLNRL DELAQYFPHG LEYKVAYETT SFVKASIEDV VKTLLEAIAL VFLVMYLFLQ
NFRATLIPTI AVPVVLMGTF SVLYAFGYSV NTLTMFAMVL AIGLLVDDAI VVVENVERIM
SEEGLTPREA TRKSMGQIQG ALVGIAMVLS AVFVPMAFFG GITGAIYRQF SITIVAAMVL
SVLVAMILTP ALCATLLKPL KKGEHHGQKG FFAWFNQMFN RNAERYEKGV AKILHRSLRW
IVIYVLLLGG MVFLFLRLPT SFLPLEDRGM FTTSVQLPSG STQQQTLKVV EQIEKYYFTH
EKDNIMSVFA TVGSGPGGNG QNVARMFIRL KDWSERDSKT GTSFAIIERA TKAFNQIKEA
RVIASSPPAI SGLGSSAGFD MELQDHAGAG HDALMAARNQ LLALAAENPE LTRVRHNGLD
DSPQLQIDID QRKAQALGVA IDDINDTLQT AWGSSYVNDF MDRGRVKKVY VQAAAPYRML
PDDINLWYVR NKDGGMVPFS AFATSRWETG SPRLERYNGY SAVEIVGEAA PGVSTGTTMD
IMESLVKQLP NGFGLEWTAM SYQERLSGAQ APALYAISLL VVFLCLAALY ESWSVPFSVM
LVVPLGVIGA LLATWMRGLE NDVYFQVGLL TVIGLSAKNA ILIVEFANEM NQKGHDLFEA
TLHACRQRLR PILMTSLAFI FGVLPMATST GAGSGGQHAV GTGVMGGMIS ATILAIYFVP
LFFVLVRRRF PLKPRPE
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