Gene EcHS_A2566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A2566 
Symbol 
ID5593216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp2575520 
End bp2576824 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content52% 
IMG OID640921687 
Producthypothetical protein 
Protein accessionYP_001459214 
Protein GI157161896 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones80 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGGA CAATGCTCTA TCTTTCTCTG CTGGCTGTTA GTTGTAGCGT CAGCGCCGCA 
AAATACCCTG TTCTGACAGA AAGCTCGCCA GAGAAAGCAG GGTTTAACGT CGAACGGCTT
AACCAGATGG ATCGCTGGAT TAGCCAGCAA GTTGATGTCG GTTATCCCGG CGTAAACCTG
CTGATCATTA AAGATAATCA GATTGTGTAT CGCAAAGCCT GGGGAGCGGC GAAAAAGTAC
GATGGCAGCG TGTTGATGGA ACAGCCTGTC AAAGCCACCA CCGGGACGCT GTATGACCTG
GCCTCAAACA CCAAAATGTA CGCCACGAAC TTCGCCCTGC AAAAGCTGAT GAGCGAAGGC
AAACTGCATC CTGACGATCG GATTGCGAAA TATATTCCGG GGTTTGCCGA TAGTCCAAAT
GACACCATTA AAGGCAAAAA CACCCTGCGG ATTTCTGACC TGCTGCATCA CAGCGGCGGT
TTCCCGGCAG ATCCGCAATA CCCGAATAAA GCGGTCGCGG GCGCGTTATA TTACCAGGAT
AAAGGCCAGA CGCTGGAGAT GATCAAGCGC ACGCCGCTAG AGTATCAGCC CGGCAGCAAG
CATATTTACA GTGATGTCGA TTATATGCTG CTTGGATTTA TCGTCGAGTC GGTCACCGGT
CAGCCGCTTG ACCGCTATGT TGAAGAGTCG ATTTATCGCC CGCTCGGCCT GACACATACG
GTATTTAACC CGCTGCTGAA AGGCTTTAAA CCGCAACAAA TTGCCGCCAC GGAATTGAAC
GGCAATACCC GCGATGGCGT GATCCATTTC CCGAATATCC GCACCTCCAC TCTCTGGGGT
CAGGTGCACG ATGAAAAAGC CTTTTATTCG ATGGGCGGCG TTTCCGGGCA CGCAGGTTTG
TTTTCCAATA CCGGCGATAT TGCGGTGTTA ATGCAAACGA TGCTGAACGG CGGGGGCTAT
GGTGATGTGC AGCTGTTCAA TGCGGAAACG GTGAAGATGT TCACCACCAG CTCTAAGGAA
GATGCCACTT TTGGCCTCGG CTGGCGCGTG AATGGTAATG CCACCATGAC GCCGACGTTT
GGCACGCTGG CAAGCCCGCA AACCTACGGT CACACTGGCT GGACCGGAAC GGTGACCGTT
ATCGATCCGG TGAATCATAT GGCGATTGTG ATGTTAAGCA ACAAGCCACA TTCTCCAGTT
GCCGATCCGC AAAAGAATCC CAATATGTTC GAAAGCGGTC AGTTGCCGAT TGCAACTTAT
GGTTGGGTAG TTGATCAGGT GTATGCGGCG TTAAAGCAGA AGTAA
 
Protein sequence
MKRTMLYLSL LAVSCSVSAA KYPVLTESSP EKAGFNVERL NQMDRWISQQ VDVGYPGVNL 
LIIKDNQIVY RKAWGAAKKY DGSVLMEQPV KATTGTLYDL ASNTKMYATN FALQKLMSEG
KLHPDDRIAK YIPGFADSPN DTIKGKNTLR ISDLLHHSGG FPADPQYPNK AVAGALYYQD
KGQTLEMIKR TPLEYQPGSK HIYSDVDYML LGFIVESVTG QPLDRYVEES IYRPLGLTHT
VFNPLLKGFK PQQIAATELN GNTRDGVIHF PNIRTSTLWG QVHDEKAFYS MGGVSGHAGL
FSNTGDIAVL MQTMLNGGGY GDVQLFNAET VKMFTTSSKE DATFGLGWRV NGNATMTPTF
GTLASPQTYG HTGWTGTVTV IDPVNHMAIV MLSNKPHSPV ADPQKNPNMF ESGQLPIATY
GWVVDQVYAA LKQK