| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A2501 |
|---|
| Symbol | dsdC |
|---|
| ID | 5593195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 2508099 |
|---|
| End bp | 2509034 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640921622 |
|---|
| Product | DNA-binding transcriptional regulator DsdC |
|---|
| Protein accession | YP_001459155 |
|---|
| Protein GI | 157161837 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR02036] D-serine deaminase transcriptional activator |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 0.987278 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACCCC TTCGTGAAAT AAGAAATCGG CTGCTTAACG GCTGGCAATT ATCAAAAATG
CATACTTTTG AAGTGGCTGC CAGGCATCAG TCCTTCGCCC TGGCGGCAGA GGAATTGTCG
CTGAGCCCCA GTGCGGTAAG TCACCGTATC AATCAGCTGG AAGAAGAATT GGGCATTCAG
TTGTTTGTTC GTTCCCATCG CAAAGTGGAA TTAACGCACG AGGGGAAACG TGTTTATTGG
GCGCTAAAAT CGTCGCTGGA TACCCTGAAC CAGGAAATTC TTGATATCAA AAATCAGGAG
TTATCGGGAA CGTTAACTCT GTATTCCCGG CCCTCTATCG CCCAATGCTG GTTGGTGCCC
GCATTAGGTG ACTTTACACG CCGGTATCCG TCTATTTCGC TCACCGTGCT CACTGGTAAT
GACAACGTCA ATCTGCAACG TGCCGGAATC GATTTGGCGA TCTACTTTGA TGATGCGCCG
TCAGCGCAAC TCACTCATCA CTTTCTGATG GATGAAGAAA TCCTGCCAGT ATGTAGCTCG
GAATACGCTC AAAGACATGC TTTAACCAAC ACGGTAATTA ACCTGTGTCA CTGTACGTTG
CTCCATGACA GACAGGCATG GAGCAACGAC TCCGGTACGG ATGAATGGCA TAGTTGGGCG
CAACATTATG CGGTTAATTT GCCGACATCT TCTGGAATTG GCTTTGATCG TTCTGATTTA
GCTGTTATTG CCGCGATGAA TCATATTGGG GTGGCGATGG GAAGAAAACG CCTGGTACAA
AAAAGGCTTG CCAGTGGTGA GCTCGTCGCG CCGTTTGGCG ATATGACGGT GAAATGCCAT
CAGCATTATT ACATCACCAC ATTACCGGGC AGGCAGTGGC CAAAAATTGA AGCGTTTATT
ACCTGGCTAA GAGAACAGGT AAAAACCACT TCATAA
|
|---|
| Protein sequence | MEPLREIRNR LLNGWQLSKM HTFEVAARHQ SFALAAEELS LSPSAVSHRI NQLEEELGIQ
LFVRSHRKVE LTHEGKRVYW ALKSSLDTLN QEILDIKNQE LSGTLTLYSR PSIAQCWLVP
ALGDFTRRYP SISLTVLTGN DNVNLQRAGI DLAIYFDDAP SAQLTHHFLM DEEILPVCSS
EYAQRHALTN TVINLCHCTL LHDRQAWSND SGTDEWHSWA QHYAVNLPTS SGIGFDRSDL
AVIAAMNHIG VAMGRKRLVQ KRLASGELVA PFGDMTVKCH QHYYITTLPG RQWPKIEAFI
TWLREQVKTT S
|
|---|
| |