| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A2497 |
|---|
| Symbol | |
|---|
| ID | 5593089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 2505872 |
|---|
| End bp | 2506627 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640921618 |
|---|
| Product | VacJ family lipoprotein |
|---|
| Protein accession | YP_001459152 |
|---|
| Protein GI | 157161834 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2853] Surface lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTTC GCCTGTCGGC GCTTGCTCTG GGAACTACGC TTCTGGTGGG GTGTGCGAGT
TCCGGTACAG ATCAGCAAGG GCGTTCTGAC CCGTTAGAAG GGTTCAACCG CACCATGTAC
AACTTCAACT TCAACGTATT AGACCCGTAT ATTGTTCGAC CGGTCGCTGT CGCCTGGCGT
GATTATGTTC CGCAACCGGC GCGTAATGGT TTGAGCAACT TTACTGGCAA CCTTGAAGAA
CCTGCGGTGA TGGTTAACTA CTTCTTGCAG GGCGACCCTT ATCAGGGGAT GGTCCACTTT
ACCCGCTTTT TCCTGAACAC CATTTTGGGG ATGGGCGGCT TTATTGATGT TGCAGGGATG
GCGAACCCGA AACTGCAACG GACTGAACCT CACCGCTTCG GTAGTACGCT TGGTCATTAT
GGCGTGGGTT ATGGGCCTTA CGTTCAGTTA CCGTTCTACG GTAGCTTCAC GCTGCGTGAT
GACGGTGGTG ATATGGCGGA TGGTCTTTAC CCGGTTCTTT CCTGGCTGAC CTGGCCGATG
TCTGTGGGTA AATGGACGCT TGAAGGGATC GAAACCCGCG CTCAGCTGCT GGATTCCGAT
GGTCTGCTGC GTCAGTCGTC CGATCCTTAT ATTATGGTGC GCGAAGCGTA CTTCCAGCGT
CATGATTTCA TCGCTAATGG CGGCGAACTC AAACCGCAGG AAAATCCGAA CGCACAAGCG
ATTCAGGATG ATTTAAAAGA TATTGATTCT GAATAA
|
|---|
| Protein sequence | MKLRLSALAL GTTLLVGCAS SGTDQQGRSD PLEGFNRTMY NFNFNVLDPY IVRPVAVAWR
DYVPQPARNG LSNFTGNLEE PAVMVNYFLQ GDPYQGMVHF TRFFLNTILG MGGFIDVAGM
ANPKLQRTEP HRFGSTLGHY GVGYGPYVQL PFYGSFTLRD DGGDMADGLY PVLSWLTWPM
SVGKWTLEGI ETRAQLLDSD GLLRQSSDPY IMVREAYFQR HDFIANGGEL KPQENPNAQA
IQDDLKDIDS E
|
|---|
| |