Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A2471 |
Symbol | pdxB |
ID | 5590970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 2478286 |
End bp | 2479422 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640921592 |
Product | erythronate-4-phosphate dehydrogenase |
Protein accession | YP_001459126 |
Protein GI | 157161808 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 75 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAATCC TTGTTGATGA AAATATGCCT TATGCCCGCG ACTTATTTAG CCGTTTGGGT GAGGTGACCG CGGTTCCCGG GCGTCCAATC CCCGTCGCTC AACTGGCAGA CGCGGATGCG CTGATGGTGC GTTCGGTCAC GAAAGTGAAT GAATCTTTGC TGGCAGGAAA ACCCATTAAA TTTGTTGGCA CTGCCACTGC GGGGACCGAC CATGTCGATG AAGCATGGTT GAAGCAGGCG GGAATTGGTT TTTCCGCTGC ACCTGGCTGT AATGCGATTG CGGTGGTGGA ATATGTTTTC TCCTCACTAC TGATGCTTGC CGAACGCGAT GGATTTTCAC TGCACGACCG TACGGTGGGG ATCGTGGGCG TTGGTAACGT TGGACGTCGA TTGCAGGCGC GACTGGAAGC GTTAGGGATT AAAACATTGC TTTGCGATCC GCCTCGCGCT GACCGTGGGG ATGAGGGTGA TTTCCGCTCG CTGGATGAAT TAGTTCAGCA TGCGGATATT CTGACTTTCC ATACGCCACT CTTCAAAGAT GGGCCGTACA AAACGCTGCA TCTGGCGGAT GAAAAACTGA TCCGTAGCCT GAAGCCGGGA GCGATTCTGA TTAACGCCTG CCGTGGCGCA GTCGTCGATA ATACTGCGTT GCTGACCTGC CTGAATGAAG GCCAGAAGTT AAGCGTAGTG CTGGATGTCT GGGAAGGCGA ACCGGAACTT AACGTGGAGT TGCTGACAAA AGTGGATATC GGCACGCCGC ATATCGCAGG TTATACCCTG GAAGGTAAAG CACGCGGTAC TACGCAAGTG TTTGAAGCCT ATAGCAAGTT TATTGGGCAT GAACAGCACG TTGCGCTGGA TACATTACTG CCCGCGCCAG AGTTTGGTCG CATTACGCTG CATGGCCCGC TCGATCAACC GACGCTGAAA AGGCTGGTGC ATTTGGTGTA TGATGTGCGC CGCGATGACG CACCGCTGCG TAAAGTCGCC GGGATACCGG GTGAGTTCGA TAAACTGCGC AAAAACTATC TTGAGCGCCG TGAATGGTCA TCTCTGTATG TAATTTGTGA TGACGCCAGT GCGGCATCAT TGCTGTGTAA ACTGGGTTTT AACGCCGTTC ATCATCCGGC ACGTTAA
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Protein sequence | MKILVDENMP YARDLFSRLG EVTAVPGRPI PVAQLADADA LMVRSVTKVN ESLLAGKPIK FVGTATAGTD HVDEAWLKQA GIGFSAAPGC NAIAVVEYVF SSLLMLAERD GFSLHDRTVG IVGVGNVGRR LQARLEALGI KTLLCDPPRA DRGDEGDFRS LDELVQHADI LTFHTPLFKD GPYKTLHLAD EKLIRSLKPG AILINACRGA VVDNTALLTC LNEGQKLSVV LDVWEGEPEL NVELLTKVDI GTPHIAGYTL EGKARGTTQV FEAYSKFIGH EQHVALDTLL PAPEFGRITL HGPLDQPTLK RLVHLVYDVR RDDAPLRKVA GIPGEFDKLR KNYLERREWS SLYVICDDAS AASLLCKLGF NAVHHPAR
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