Gene EcHS_A2439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A2439 
Symbol 
ID5592366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp2449132 
End bp2450349 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content50% 
IMG OID640921562 
Productaminotransferase AlaT 
Protein accessionYP_001459096 
Protein GI157161778 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCCCA TTGAAAAATC CAGCAAATTA GAGAATGTCT GTTATGACAT CCGTGGTCCG 
GTGCTGAAAG AAGCAAAACG CCTGGAAGAA GAAGGTAACA AGGTACTGAA ACTGAACATC
GGCAACCCAG CCCCGTTCGG TTTTGACGCG CCAGATGAAA TCCTCGTTGA CGTGATACGC
AACCTGCCTA CCGCTCAAGG GTATTGCGAT TCCAAAGGTC TTTACTCCGC GCGTAAAGCC
ATCATGCAGC ACTACCAGGC TCGTGGCATG CGTGATGTTA CCGTGGAAGA TATTTACATC
GGCAATGGTG TATCGGAGCT TATCGTTCAG GCAATGCAGG CATTGCTGAA CAGCGGGGAC
GAAATGTTGG TTCCTGCACC AGATTACCCA CTATGGACCG CGGCGGTTTC GCTTTCCAGC
GGTAAAGCGG TGCATTATCT TTGCGATGAA TCCTCTGACT GGTTCCCGGA CCTCGATGAT
ATTCGCGCTA AAATTACGCC TCGTACGCGT GGGATCGTTA TTATCAACCC AAATAACCCA
ACCGGCGCGG TATATTCCAA AGAGCTTTTA ATGGAGATTG TGGAGATTGC ACGTCAGCAT
AATCTCATTA TCTTCGCCGA TGAAATTTAT GACAAAATTC TCTACGACGA CGCTGAGCAT
CACTCAATTG CACCGCTGGC ACCTGACCTG CTGACCATTA CCTTTAACGG ACTGTCGAAA
ACGTACCGCG TTGCAGGCTT CCGTCAGGGG TGGATGGTGT TGAACGGGCC GAAAAAACAC
GCCAAAGGCT ACATCGAAGG TCTGGAAATG CTGGCTTCAA TGCGCCTGTG TGCTAACGTT
CCTGCGCAAC ACGCCATTCA GACCGCGCTA GGTGGTTATC AGAGCATCAG TGAATTTATT
ACCCCTGGCG GTCGTCTTTA TGAGCAGCGT AACCGCGCGT GGGAACTGAT CAACGATATT
CCGGGCGTTT CCTGCGTGAA ACCTCGTGGT GCGCTGTATA TGTTCCCGAA AATCGACGCC
AAACGCTTTA ACATTCACGA CGATCAGAAA ATGGTGCTGG ATTTCCTGTT GCAGGAAAAA
GTTCTGTTGG TGCAAGGGAC GGCATTCAAC TGGCCGTGGC CGGATCACTT CCGCATTGTC
ACGCTACCGC GTGTCGATGA TATCGAGCTG TCTTTGAGCA AGTTCGCGCG TTTCCTTTCT
GGTTATCATC AGCTGTAA
 
Protein sequence
MSPIEKSSKL ENVCYDIRGP VLKEAKRLEE EGNKVLKLNI GNPAPFGFDA PDEILVDVIR 
NLPTAQGYCD SKGLYSARKA IMQHYQARGM RDVTVEDIYI GNGVSELIVQ AMQALLNSGD
EMLVPAPDYP LWTAAVSLSS GKAVHYLCDE SSDWFPDLDD IRAKITPRTR GIVIINPNNP
TGAVYSKELL MEIVEIARQH NLIIFADEIY DKILYDDAEH HSIAPLAPDL LTITFNGLSK
TYRVAGFRQG WMVLNGPKKH AKGYIEGLEM LASMRLCANV PAQHAIQTAL GGYQSISEFI
TPGGRLYEQR NRAWELINDI PGVSCVKPRG ALYMFPKIDA KRFNIHDDQK MVLDFLLQEK
VLLVQGTAFN WPWPDHFRIV TLPRVDDIEL SLSKFARFLS GYHQL