| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A2387 |
|---|
| Symbol | |
|---|
| ID | 5591858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 2398829 |
|---|
| End bp | 2399632 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640921514 |
|---|
| Product | putative aldolase |
|---|
| Protein accession | YP_001459048 |
|---|
| Protein GI | 157161730 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCAT TATTAAGCAA TCCCTTTAAA GAACGTTTAC GCAAGGGCGA AGTGCAAATT
GGTCTGTGGT TAAGCTCAAC GACTGCCTAT ATGGCAGAAA TTGCCGCCAC TTCTGGTTAT
GACTGGTTGC TGATTGACGG GGAGCACGCG CCAAACACCA TTCAGGATCT TTATCATCAG
CTACAGGCGG TAGCGCCCTA TGCCAGCCAA CCCGTGATCC GTCCGGTGGA AGGCAGTAAA
CCGCTGATTA AACAAGTCCT GGATATTGGC GCGCAAACTC TACTGATCCC GATGGTCGAT
ACTGCCGAAC AGGCACGTCA GGTGGTGTCT GCCACGCGCT ATCCTCCCTA CGGTGAGCGT
GGTGTCGGGG CCAGTGTGGC ACGGGCTGCG CGCTGGGGAC GCATTGAGAA TTACATGGCG
CAAGTTAACG ATTCGCTTTG TCTGTTGGTG CAGGTGGAAA GTAAAACGGC ACTGGATAAC
CTGGACGAAA TCCTCGACGT CGAAGGGATT GATGGCGTGT TTATTGGACC TGCGGATCTT
TCTGCGTCGT TGGGCTACCC GGATAACGCC GGGCACCCGG AAGTGCAGCG AATTATTGAA
ACCAGTATTC GGCGGATCCG TGCTGCGGGT AAAGCGGCTG GTTTTCTGGC TGTGGCTCCT
GATATGGCGC AGCAATGCCT GGCGTGGGGA GCGAACTTTG TCGCTGTTGG CGTTGACACG
ATGCTCTACA GCGATGCCCT GGATCAACGA CTGGCGATGT TTAAATCAGG CAAAAATGGG
CCACGCATAA AAGGTAGTTA TTGA
|
|---|
| Protein sequence | MNALLSNPFK ERLRKGEVQI GLWLSSTTAY MAEIAATSGY DWLLIDGEHA PNTIQDLYHQ
LQAVAPYASQ PVIRPVEGSK PLIKQVLDIG AQTLLIPMVD TAEQARQVVS ATRYPPYGER
GVGASVARAA RWGRIENYMA QVNDSLCLLV QVESKTALDN LDEILDVEGI DGVFIGPADL
SASLGYPDNA GHPEVQRIIE TSIRRIRAAG KAAGFLAVAP DMAQQCLAWG ANFVAVGVDT
MLYSDALDQR LAMFKSGKNG PRIKGSY
|
|---|
| |