| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A2353 |
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| Symbol | apbE |
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| ID | 5593769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 2351460 |
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| End bp | 2352515 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640921479 |
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| Product | thiamine biosynthesis lipoprotein ApbE |
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| Protein accession | YP_001459014 |
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| Protein GI | 157161696 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 0.180218 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATAA GCTTTACCCG CGTGGCACTG CTGGCTGCCG CGCTCTTTTT TGTTGGTTGC
GATCAAAAAC CACAACCCGC CAAAACCCAC GCTACTGAAG TTACCGTTCT TGAAGGCAAA
ACCATGGGTA CCTTCTGGCG TGCCAGCATC CCGGGCATTG ATGCCAAACG CAGTGCCGAA
CTTAAAGAAA AGATTCAGAC CCAGCTGGAC GCCGACGATC AGCTGCTTTC GACCTATAAA
AAAGATTCCG CGCTGATGTG CTTTAACGAT TCGCAAAGTT TATCGCCGTG GCCGGTAAGT
GAAGCGATGG CCGATATCGT CACCACCTCG CTGCGCATTG GCGCGAAGAC CGATGGCGCG
ATGGATATAA CCGTCGGGCC GCTGGTGAAT CTGTGGGGCT TTGGCCCGGA ACAACAGCCG
GTTCAAATTC CGAGCCAGGA ACAGATCGAT GCGATGAAAG CCAAAACCGG CTTACAGCAC
CTGACGGTCA TCAATCAGTC GCATCAGCAA TATCTGCAAA AAGACCTGCC GGATTTATAT
GTCGATCTCT CCACCGTCGG TGAAGGTTAT GCGGCGGATC ACCTGGCACG CTTGATGGAG
CAGGAAGGGA TTTCCCGCTA TCTGGTGTCG GTGGGCGGCG CGCTGAACAG CCGTGGTATG
AACGGTGAAG GCCAGCCGTG GCGGGTAGCG ATTCAAAAAC CAACCGATAA AGAAAACGCG
GTTCAAGCTG TGGTGGATAT CAACGGTCAT GGGATTAGCA CCTCTGGCAG CTACCGTAAC
TATTACGAAC TGGACGGCAA ACGTCTTTCC CATGTTATCG ATCCGCAAAC CGGGCGTCCC
ATCGAACACA ATCTGGTATC CGTGACGGTG ATTGCTCCGA CGGCGCTGGA AGCCGATGCC
TGGGATACTG GCTTAATGGT ACTCGGGCCG GAGAAAGCCA AAGAGGTTGT TCGCCGGGAA
GGGCTGGCGG TTTATATGAT CACCAAAGAA GGCGATAGCT TTAAAACCTG GATGTCACCA
CAGTTTAAAA GCTTCCTTGT CAGCGAAAAA AATTAA
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| Protein sequence | MEISFTRVAL LAAALFFVGC DQKPQPAKTH ATEVTVLEGK TMGTFWRASI PGIDAKRSAE
LKEKIQTQLD ADDQLLSTYK KDSALMCFND SQSLSPWPVS EAMADIVTTS LRIGAKTDGA
MDITVGPLVN LWGFGPEQQP VQIPSQEQID AMKAKTGLQH LTVINQSHQQ YLQKDLPDLY
VDLSTVGEGY AADHLARLME QEGISRYLVS VGGALNSRGM NGEGQPWRVA IQKPTDKENA
VQAVVDINGH GISTSGSYRN YYELDGKRLS HVIDPQTGRP IEHNLVSVTV IAPTALEADA
WDTGLMVLGP EKAKEVVRRE GLAVYMITKE GDSFKTWMSP QFKSFLVSEK N
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