Gene EcHS_A2351 details

Gene Information

• Locus tag: EcHS_A2351
• Symbol: alkB
• ID: 5590977
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: -
• Start bp: 2349672
• End bp: 2350322
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640921477
• Product: alkylated DNA repair protein AlkB
• Protein accession: YP_001459012
• Protein GI: 157161694
• COG category: [L] Replication, recombination and repair
• COG ID: [COG3145] Alkylated DNA repair protein
• TIGRFAM ID: [TIGR00568] DNA alkylation damage repair protein AlkB

Plasmid Coverage information

• Num covering plasmid clones: 51
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGGATC TGTTTGCCGA TGCTGAACCG TGGCAAGAGC CACTGGCGGC TGGAGCGGTA 
ATTTTGCACC GTTTTGCTTT TAACGCTGCG GAGCAACTAA TCCGCGATAT TAATGACGTT 
GCCAGCCAGT CGCCGTTTCG CCAGATGGTC ACCCCCGGGG GATATACCAT GTCGGTGGCG 
ATGACCAACT GTGGGCATCT GGGCTGGACG AGCCATCGGC AAGGTTATCT CTATTCGCCC 
ATTGATCCGC AAACAAATAA ACCGTGGCCC GCCATGCCAC AGAGTTTTCA TAATTTATGT 
CAACGTGCGG CTACGGCGGC GGGCTATCCA GATTTCCAGC CAGATGCTTG TCTTATCAAC 
CGCTACGCTC CTGGCGCGAA ACTGTCGCTG CATCAGGATA AAGACGAACC GGATCTGCGC 
GCGCCAATTG TTTCTGTTTC TCTGGGCTTA CCCGCGATTT TTCAATTTGG CGGCCTGAAA 
CGAAATGATC CGCTCAAACG TTTGTTGTTG GAACATGGCG ATGTGGTGGT ATGGGGCGGT 
GAATCGCGGC TGTTTTATCA CGGTATTCAA CCGTTGAAAG CGGGGTTTCA TCCACTCACC 
ATCGACTGCC GCTACAACCT GACATTCCGT CAGGCAGGTA AAAAAGAATA A 

 

Protein sequence

MLDLFADAEP WQEPLAAGAV ILHRFAFNAA EQLIRDINDV ASQSPFRQMV TPGGYTMSVA 
MTNCGHLGWT SHRQGYLYSP IDPQTNKPWP AMPQSFHNLC QRAATAAGYP DFQPDACLIN 
RYAPGAKLSL HQDKDEPDLR APIVSVSLGL PAIFQFGGLK RNDPLKRLLL EHGDVVVWGG 
ESRLFYHGIQ PLKAGFHPLT IDCRYNLTFR QAGKKE