Gene EcHS_A2350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A2350 
Symbol 
ID5590976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp2347953 
End bp2349596 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content53% 
IMG OID640921476 
Productmultidrug transporter membrane component/ATP-binding component 
Protein accessionYP_001459011 
Protein GI157161693 
COG category[P] Inorganic ion transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4615] ABC-type siderophore export system, fused ATPase and permease components 
TIGRFAM ID[TIGR01194] cyclic peptide transporter 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTTC TTGTACTTGT CTGGCGGCAG TATCGCTGGC CATTTATCAG TGTGATGGCG 
CTAAGCCTCG CCAGTGCGGC ATTAGGCATT GGCTTAATTG CTTTTATCAA TCAGCGCCTT
ATCGAAACGG CGGATACCAG TCTGCTGGTG TTGCCGGAGT TTCTGGGATT ATTGCTGCTG
TTGATGGCAG TCACTCTCGG ATCGCAACTG GCGCTCACCA CTTTGGGGCA TCACTTCGTT
TACCGACTGC GTAGTGAATT TATCAAGCGG ATTCTGGATA CTCACGTCGA GCGCATTGAA
CAACTCGGTA GCGCCTCGTT GCTGGCGGGG TTAACCAGCG ATGTGCGCAA TATCACCATT
GCTTTTGTGC GTCTGCCGGA ACTGGTGCAG GGGATCATTC TCACTATCGG TTCAGCGGCG
TATCTGTGGA TGCTGTCGGG CAAAATGTTG CTGGTAACGG CTATCTGGAT GGCGATCACC
ATCTGGGGCG GTTTTGTGCT GGTGGCGCGG GTGTACAAAC ATATGGCGAC CCTGCGTGAA
ACCGAAGACA AGCTGTACAC GGATTTTCAA ACTGTACTTG AAGGGCGCAA AGAGCTGACT
CTGAACCGGG AACGCGCCGA GTATGTGTTT AACAACCTCT ACATTCCTGA TGCGCAAGAG
TATCGCCATC ATATTATTCG CGCAGACACC TTCCATCTTA GTGCCGTGAA CTGGTCAAAC
ATCATGATGC TGGGCGCAAT CGGCCTGGTG TTCTGGATGG CGAACAGCCT CGGTTGGGCT
GATACCAACG TTGCCGCGAC CTATTCGTTG ACGCTTTTAT TCCTGCGTAC GCCGCTGCTT
TCGGCGGTTG GCGCATTGCC GACGCTGCTG ACGGCGCAGG TGGCGTTTAA CAAGCTGAAC
AAATTCGCGC TCGCGCCTTT CAAAGCAGAG TTTCCGCGCC CGCAGGCGTT TCCCAACTGG
CAAACGCTGG AGCTGCGTAA CGTGACGTTT GCTTATCAGG ATAACGCGTT TTCCGTTGGT
CCGATTAATC TCACCATCAA ACGTGGCGAG CTGCTGTTTC TGATTGGCGG CAACGGTAGC
GGAAAATCGA CGCTGGCGAT GTTGTTGACG GGCTTGTATC AGCCACAAAG CGGCGAAATC
TTGCTGGATG GCAAACCTGT CAGCGGCGAA CAACCGGAAG ATTATCGCAA ACTGTTTTCG
GCAGTGTTTA CCGATGTCTG GCTGTTTGAT CAACTGCTGG GGCCGGAGGG TAAACCCGCT
AACCCGCAAC TGGTTGAGAA GTGGCTGGCG CAGCTGAAAA TGGCTCATAA GCTTGAGTTA
AGCAACGGGC GTATTGTTAA CCTGAAGTTA TCAAAAGGGC AGAAAAAACG CGTGGCGCTG
TTGCTGGCGC TGGCAGAAGA ACGCGATATT ATCCTGCTGG ATGAATGGGC GGCGGATCAG
GATCCACACT TCCGTCGTGA GTTTTATCAG GTGTTGCTGC CGCTGATGCA GGAGATGGGT
AAAACTATTT TCGCCATCAG TCATGATGAT CATTACTTTA TCCACGCCGA CCGCCTGCTG
GAAATGCGCA ACGGGCAACT TAGCGAGCTG ACGGGCGAAG AGCGCGATGC TGCTTCGCGT
GATGCCGTTG CCCGGACGGC ATAA
 
Protein sequence
MELLVLVWRQ YRWPFISVMA LSLASAALGI GLIAFINQRL IETADTSLLV LPEFLGLLLL 
LMAVTLGSQL ALTTLGHHFV YRLRSEFIKR ILDTHVERIE QLGSASLLAG LTSDVRNITI
AFVRLPELVQ GIILTIGSAA YLWMLSGKML LVTAIWMAIT IWGGFVLVAR VYKHMATLRE
TEDKLYTDFQ TVLEGRKELT LNRERAEYVF NNLYIPDAQE YRHHIIRADT FHLSAVNWSN
IMMLGAIGLV FWMANSLGWA DTNVAATYSL TLLFLRTPLL SAVGALPTLL TAQVAFNKLN
KFALAPFKAE FPRPQAFPNW QTLELRNVTF AYQDNAFSVG PINLTIKRGE LLFLIGGNGS
GKSTLAMLLT GLYQPQSGEI LLDGKPVSGE QPEDYRKLFS AVFTDVWLFD QLLGPEGKPA
NPQLVEKWLA QLKMAHKLEL SNGRIVNLKL SKGQKKRVAL LLALAEERDI ILLDEWAADQ
DPHFRREFYQ VLLPLMQEMG KTIFAISHDD HYFIHADRLL EMRNGQLSEL TGEERDAASR
DAVARTA