Gene EcHS_A2334 details

Gene Information

• Locus tag: EcHS_A2334
• Symbol: ccmF
• ID: 5591291
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: -
• Start bp: 2333940
• End bp: 2335883
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 640921460
• Product: cytochrome c-type biogenesis protein CcmF
• Protein accession: YP_001458995
• Protein GI: 157161677
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1138] Cytochrome c biogenesis factor
• TIGRFAM ID: [TIGR00353] c-type cytochrome biogenesis protein CcmF

Plasmid Coverage information

• Num covering plasmid clones: 48
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGCCGG AAATTGGTAA CGGGCTGCTG TGTCTGGCGC TAGGAATTGC GCTGCTGCTG 
TCCGTGTATC CGCTATGGGG CGTAGCGCGC GGAGATGCGC GCATGATGGC GTCTTCCCGC 
TTGTTTGCCT GGCTGCTGTT TATGTCTGTG GCTGGCGCAT TTCTGGTACT GGTCAATGCC 
TTCGTGGTCA ACGACTTCAC CGTCACCTAT GTTGCCAGCA ACTCCAATAC CCAGCTTCCG 
GTGTGGTATC GCGTGGCGGC TACCTGGGGC GCGCATGAAG GCTCGCTCCT GCTGTGGGTG 
CTGCTGATGA GCGGCTGGAC CTTTGCGGTA GCGATTTTTA GTCAGCGTAT TCCGCTGGAT 
ATTGTGGCCC GCGTACTGGC GATAATGGGG ATGGTCAGCG TCGGCTTTTT GCTGTTCATT 
CTCTTTACCT CTAACCCGTT CTCACGCACG TTGCCGAACT TCCCGATTGA AGGGCGCGAT 
CTTAACCCGC TGTTACAGGA TCCGGGGCTG ATCTTCCATC CGCCTCTGCT CTATATGGGG 
TACGTGGGGT TCTCGGTGGC GTTTGCTTTT GCCATTGCTT CTTTGCTGAG CGGGCGTCTG 
GACAGCACTT ATGCGCGTTT TACTCGCCCG TGGACGCTGG CGGCGTGGAT TTTCCTGACG 
CTCGGCATTG TGCTCGGTTC CGCATGGGCC TATTACGAAC TCGGCTGGGG CGGCTGGTGG 
TTCTGGGATC CGGTAGAAAA CGCCTCGTTT ATGCCGTGGC TGGTGGGGAC TGCGCTGATG 
CACTCACTGG CGGTCACTGA ACAACGCGCC AGTTTCAAAG CGTGGACATT ACTGCTGGCA 
ATCAGTGCCT TCTCGTTGTG TCTGCTGGGG ACCTTCCTCG TGCGTTCCGG CGTGCTGGTA 
TCGGTACACG CGTTTGCGTC TGATCCGGCG CGCGGTATGT TTATCCTCGC CTTTATGGTG 
CTGGTGATTG GCGGTTCGCT GCTGCTGTTT GCCGCGCGTG GACACAAAGT TCGCTCACGC 
GTAAACAATG CGCTGTGGTC GCGGGAATCT TTGCTGTTAG CGAACAATGT TTTGCTGGTC 
GCTGCGATGC TGGTGGTGTT GCTGGGGACG CTGCTGCCGT TGGTGCATAA GCAACTGGGA 
CTGGGCAGTA TTTCGATTGG CGAACCGTTC TTCAACACCA TTTTTACCTG GCTGATGGTG 
CCGTTTGCGC TACTGCTTGG TGTCGGTCCT CTGGTGCGCT GGGGGCGGGA TCGCCCGCGT 
AAGATCCGCA ATTTATTGAT TATCGCCTTC ATCTCTACGC TGGTGCTGTC GCTGCTGTTG 
CCGTGGCTGT TCGAAAGCAA AGTTGTGGCG ATGACGGTGC TCGGCCTGGC AATGGCCTGC 
TGGATTGCGG TGCTGGCAAT TGCGGAAGCT GCGCTACGTA TTTCACGCGG CACGAAAACC 
ACCTTCAGTT ATTGGGGGAT GGTGGCGGCT CACCTTGGGC TGGCAGTGAC AATTGTTGGC 
ATTGCCTTTA GCCAGAACTA TAGCGTTGAG CGTGATGTGC GCATGAAGTC CGGCGATAGC 
GTCGATATTC ATGAATATCG CTTCACCTTC CGTGATGTCA AAGAGGTGAC TGGCCCGAAC 
TGGCGTGGCG GTGTGGCGAC TATCGGCGTA ACGCGCGATG GCAAGCCGGA AACGGTGCTG 
TATGCGGAAA AACGTTATTA CAACACTGCC GGGTCGATGA TGACCGAAGC GGCAATTGAC 
GGCGGCATCA CGCGTGACCT GTACGCCGCG CTCGGTGAAG AGCTGGAAAA CGGCGCGTGG 
GCCGTGCGTC TTTACTACAA ACCATTTGTT CGCTGGATTT GGGCGGGCGG GCTGATGATG 
GCGTTGGGCG GACTGCTGTG TCTGTTTGAT CCTCGCTATC GTAAGCGCGT GAGTCCGCAA 
AAAACTGCGC CGGAGGCCGT ATGA 

 

Protein sequence

MMPEIGNGLL CLALGIALLL SVYPLWGVAR GDARMMASSR LFAWLLFMSV AGAFLVLVNA 
FVVNDFTVTY VASNSNTQLP VWYRVAATWG AHEGSLLLWV LLMSGWTFAV AIFSQRIPLD 
IVARVLAIMG MVSVGFLLFI LFTSNPFSRT LPNFPIEGRD LNPLLQDPGL IFHPPLLYMG 
YVGFSVAFAF AIASLLSGRL DSTYARFTRP WTLAAWIFLT LGIVLGSAWA YYELGWGGWW 
FWDPVENASF MPWLVGTALM HSLAVTEQRA SFKAWTLLLA ISAFSLCLLG TFLVRSGVLV 
SVHAFASDPA RGMFILAFMV LVIGGSLLLF AARGHKVRSR VNNALWSRES LLLANNVLLV 
AAMLVVLLGT LLPLVHKQLG LGSISIGEPF FNTIFTWLMV PFALLLGVGP LVRWGRDRPR 
KIRNLLIIAF ISTLVLSLLL PWLFESKVVA MTVLGLAMAC WIAVLAIAEA ALRISRGTKT 
TFSYWGMVAA HLGLAVTIVG IAFSQNYSVE RDVRMKSGDS VDIHEYRFTF RDVKEVTGPN 
WRGGVATIGV TRDGKPETVL YAEKRYYNTA GSMMTEAAID GGITRDLYAA LGEELENGAW 
AVRLYYKPFV RWIWAGGLMM ALGGLLCLFD PRYRKRVSPQ KTAPEAV