Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A2242 |
Symbol | rcnA |
ID | 5591610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 2228266 |
End bp | 2229090 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640921372 |
Product | nickel/cobalt efflux protein RcnA |
Protein accession | YP_001458908 |
Protein GI | 157161590 |
COG category | [R] General function prediction only |
COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 0.790199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAAT TTACAACTCT TCTTCAGCAA GGAAACGCCT GGTTCTTCAT CCCCAGCGTC ATCTTACTTG GTGCGCTTCA TGGCCTGGAA CCAGGGCACT CAAAAACGAT GATGGCGGCG TTTATCATCG CCATCAAAGG CACCATTAAA CAAGCGGTGA TGCTCGGACT GGCAGCAACT ATTTCGCATA CCGCAGTGGT CTGGTTAATT GCCTTTGGCG GGATGGTGAT CAGCAAGCGC TTTACTGCTC AATCAGCAGA ACCGTGGCTC CAGCTGATTT CCGCAGTGAT CATTATTAGC ACCGCGTTCT GGATGTTCTG GCGTACCTGG CGCGGCGAAC GCAACTGGCT GGAGAATATG CACGGGCATG ATTATGAGCA TCATCATCAC GATCACGAAC ATCACCACGA CCATGGACAT CATCACCATC ACGAACATGG CGAGTATCAG GATGCCCATG CACGAGCCCA TGCCAATGAC ATTAAACGAC GCTTTGATGG TAGAGAGGTC ACCAACTGGC AAATTTTGTT ATTTGGCTTA ACCGGTGGCC TTATCCCCTG CCCGGCAGCA ATTACCGTGC TGTTGATATG CATTCAGTTG AAAGCCCTGA CACTGGGCGC AACACTGGTC GTCAGTTTCA GCATTGGCCT GGCGTTAACG CTTGTCACCG TAGGCGTTGG CGCAGCAATC AGCGTTCAGC AGGTCGCAAA ACGCTGGAGC GGATTTAACA CTCTCGCTAA ACGCGCCCCC TATTTTTCCA GTCTGTTGAT TGGCTTAGTC GGTGTGTATA TGGGCGTACA TGGCTTCATG GGCATAATGC GATAA
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Protein sequence | MTEFTTLLQQ GNAWFFIPSV ILLGALHGLE PGHSKTMMAA FIIAIKGTIK QAVMLGLAAT ISHTAVVWLI AFGGMVISKR FTAQSAEPWL QLISAVIIIS TAFWMFWRTW RGERNWLENM HGHDYEHHHH DHEHHHDHGH HHHHEHGEYQ DAHARAHAND IKRRFDGREV TNWQILLFGL TGGLIPCPAA ITVLLICIQL KALTLGATLV VSFSIGLALT LVTVGVGAAI SVQQVAKRWS GFNTLAKRAP YFSSLLIGLV GVYMGVHGFM GIMR
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