Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A2238 |
Symbol | |
ID | 5592178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 2225182 |
End bp | 2226000 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640921368 |
Product | glycosy hydrolase family protein |
Protein accession | YP_001458904 |
Protein GI | 157161586 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCTAA GAATTACCAG TCGAAAAAAA CTCACCTCTC TATTATGCGC TCTTGGGCTA ATTTCCATCA TTGCAATTTA TCCGCGTCAG ACGGTGAATT TTTTCTATTC GACAGCAGTT CAGATTAAAG ACTACATCCA CTTCTACGGT TATCGCCCGG TTAAATCTTT CGCAATTCGC ATTCCTGCCA GTTATACCAT TCACGGAATA GATGTTTCGC GCTGGCAGGA GCGGATCGAC TGGCAGCGGG TGGCAAAAAT GCGCGACAAC GGTATCCGCT TACAGTTTGC TTTTATTAAG GCGACGGAAG GCGAAAAGCT GGTGGACCCC TATTTTTCGC GTAACTGGCA ACTAAGCCGC GAAAATGGCA TGCTGCGTGG GGCGTATCAT TATTTCTCCC CGTCGGTATC CGCTTCAGTT CAGGCGCGAT TATTTCTGCA AACGGTGGAT TTCTCACAAG GCGATTTCCC TGCCGTGCTG GACGTAGAAG AACGGGGAAA ATTATCGGCA AAAGAATTAC GCAAGCGGGT AAGTCAGTGG CTAAAAATGG TAGAAAAACG CACGGGAAAA AAGCCGATTA TTTACTCAGG AGCCGTTTTT TATCACACGA ATCTGGCGGG CTATTTTAAT GAATATCCGT GGTGGGTGGC TCACTATTAT CAACGTCGTC CGGACAATGA CGGAATGGCC TGGCGCTTCT GGCAGCATTC CGACCGTGGA CAGGTAGATG GCATCAATGG TCCGGTAGAT TTTAATGTGT TTAATGGCAC GGTGGAGGAG TTGCAGGGAT TCGTTGATGG GATTAAAGAA ACGCCTTAA
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Protein sequence | MQLRITSRKK LTSLLCALGL ISIIAIYPRQ TVNFFYSTAV QIKDYIHFYG YRPVKSFAIR IPASYTIHGI DVSRWQERID WQRVAKMRDN GIRLQFAFIK ATEGEKLVDP YFSRNWQLSR ENGMLRGAYH YFSPSVSASV QARLFLQTVD FSQGDFPAVL DVEERGKLSA KELRKRVSQW LKMVEKRTGK KPIIYSGAVF YHTNLAGYFN EYPWWVAHYY QRRPDNDGMA WRFWQHSDRG QVDGINGPVD FNVFNGTVEE LQGFVDGIKE TP
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