Gene EcHS_A2238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A2238 
Symbol 
ID5592178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp2225182 
End bp2226000 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content47% 
IMG OID640921368 
Productglycosy hydrolase family protein 
Protein accessionYP_001458904 
Protein GI157161586 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCTAA GAATTACCAG TCGAAAAAAA CTCACCTCTC TATTATGCGC TCTTGGGCTA 
ATTTCCATCA TTGCAATTTA TCCGCGTCAG ACGGTGAATT TTTTCTATTC GACAGCAGTT
CAGATTAAAG ACTACATCCA CTTCTACGGT TATCGCCCGG TTAAATCTTT CGCAATTCGC
ATTCCTGCCA GTTATACCAT TCACGGAATA GATGTTTCGC GCTGGCAGGA GCGGATCGAC
TGGCAGCGGG TGGCAAAAAT GCGCGACAAC GGTATCCGCT TACAGTTTGC TTTTATTAAG
GCGACGGAAG GCGAAAAGCT GGTGGACCCC TATTTTTCGC GTAACTGGCA ACTAAGCCGC
GAAAATGGCA TGCTGCGTGG GGCGTATCAT TATTTCTCCC CGTCGGTATC CGCTTCAGTT
CAGGCGCGAT TATTTCTGCA AACGGTGGAT TTCTCACAAG GCGATTTCCC TGCCGTGCTG
GACGTAGAAG AACGGGGAAA ATTATCGGCA AAAGAATTAC GCAAGCGGGT AAGTCAGTGG
CTAAAAATGG TAGAAAAACG CACGGGAAAA AAGCCGATTA TTTACTCAGG AGCCGTTTTT
TATCACACGA ATCTGGCGGG CTATTTTAAT GAATATCCGT GGTGGGTGGC TCACTATTAT
CAACGTCGTC CGGACAATGA CGGAATGGCC TGGCGCTTCT GGCAGCATTC CGACCGTGGA
CAGGTAGATG GCATCAATGG TCCGGTAGAT TTTAATGTGT TTAATGGCAC GGTGGAGGAG
TTGCAGGGAT TCGTTGATGG GATTAAAGAA ACGCCTTAA
 
Protein sequence
MQLRITSRKK LTSLLCALGL ISIIAIYPRQ TVNFFYSTAV QIKDYIHFYG YRPVKSFAIR 
IPASYTIHGI DVSRWQERID WQRVAKMRDN GIRLQFAFIK ATEGEKLVDP YFSRNWQLSR
ENGMLRGAYH YFSPSVSASV QARLFLQTVD FSQGDFPAVL DVEERGKLSA KELRKRVSQW
LKMVEKRTGK KPIIYSGAVF YHTNLAGYFN EYPWWVAHYY QRRPDNDGMA WRFWQHSDRG
QVDGINGPVD FNVFNGTVEE LQGFVDGIKE TP