| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A2225 |
|---|
| Symbol | |
|---|
| ID | 5592643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 2212324 |
|---|
| End bp | 2213223 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640921355 |
|---|
| Product | lipid kinase |
|---|
| Protein accession | YP_001458891 |
|---|
| Protein GI | 157161573 |
|---|
| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
|---|
| TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAT TTCCCGCCAG CTTACTGATT CTTAATGGCA AAAGTACTGA CAATCTACCC
TTGCGCGAAG CAATTATGCT GTTGCGTGAG GAAGGAATGA CGATCCATGT GCGGGTCACC
TGGGAGAAAG GCGATGCCGC ACGATATGTA GAGGAGGCCC GGAAGTTGGG CGTCGCAACG
GTGATTGCCG GTGGTGGCGA TGGCACCATT AATGAAGTTT CTACGGCGTT GATTCAGTGT
GAGGGGGATG ACATACCCGC GCTGGGAATT TTGCCATTAG GAACCGCCAA TGATTTTGCC
ACCAGTGTAG GGATTCCTGA GGCACTGGAT AAGGCGCTGA AACTGGCAAT TGCCGGTGAC
GCCATTGCGA TAGATATGGC GCAGGTCAAC AAACAAACCT GTTTTATTAA TATGGCGACA
GGCGGATTTG GGACGCGTAT TACCACAGAA ACGCCGGAAA AATTAAAAGC CGCGCTGGGT
AGCGTCTCTT ACATCATTCA TGGCTTAATG CGTATGGATA CTCTGCAACC GGACCGTTGT
GAAATCCGCG GTGAAAACTT TCACTGGCAA GGTGACGCCC TGGTCATTGG TATTGGTAAC
GGGCGTCAGG CCGGTGGCGG TCAGCAATTG TGTCCGAACG CGTTAATTAA CGATGGCTTG
CTGCAACTGC GCATTTTTAC CGGCGATGAA ATACTTCCGG CTCTCGTATC AACCTTAAAA
TCTGACGAAG ATAACCCGAA TATTATCGAA GGCGCTTCGT CGTGGTTTGA TATTCAGGCA
CCACACGACA TCACCTTTAA TCTTGATGGC GAACCGTTGA GTGGGCAAAA TTTTCATATT
GAAATACTTC CGGCAGCGTT GCGTTGTCGA TTACCACCAG ATTGTCCACT GTTGCGTTAA
|
|---|
| Protein sequence | MAEFPASLLI LNGKSTDNLP LREAIMLLRE EGMTIHVRVT WEKGDAARYV EEARKLGVAT
VIAGGGDGTI NEVSTALIQC EGDDIPALGI LPLGTANDFA TSVGIPEALD KALKLAIAGD
AIAIDMAQVN KQTCFINMAT GGFGTRITTE TPEKLKAALG SVSYIIHGLM RMDTLQPDRC
EIRGENFHWQ GDALVIGIGN GRQAGGGQQL CPNALINDGL LQLRIFTGDE ILPALVSTLK
SDEDNPNIIE GASSWFDIQA PHDITFNLDG EPLSGQNFHI EILPAALRCR LPPDCPLLR
|
|---|
| |