| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A2216 |
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| Symbol | mdtA |
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| ID | 5592055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 2198257 |
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| End bp | 2199504 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640921346 |
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| Product | multidrug efflux system subunit MdtA |
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| Protein accession | YP_001458883 |
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| Protein GI | 157161565 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 74 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGTA GTTATAAATC CCGTTGGGTA ATCGTAATCG TGGTGGTTAT CGCCGCCATC
GCCGCATTCT GGTTCTGGCA AGGCCGCAAT GACTCCCGGA GTGCAGCCCC AGGGGCGACG
AAACAAGCGC AGCAATCGCC AGCGGGTGGT CGACGTGGTA TGCGTTCCGG CCCATTAGCC
CCGGTTCAGG CGGCGACCGC CGTAGAACAG GCAGTTCCGC GTTACCTCAC CGGGCTTGGC
ACCATTACCG CCGCTAATAC CGTTACGGTG CGCAGCCGCG TGGACGGCCA ACTGATAGCG
TTACATTTCC AGGAAGGCCA GCAGGTCAAA GCAGGCGATT TACTGGCAGA AATTGACCCC
AGCCAGTTCA AAGTTGCATT AGCACAAGCC CAGGGCCAAC TGGCAAAAGA TAAAGCCACG
CTTGCCAACG CCCGCCGTGA CCTGGCGCGT TATCAACAAC TGGCAAAAAC CAATCTCGTT
TCCCGCCAGG AGCTGGATGC CCAACAGGCG CTGGTCAGTG AAACCGAAGG CACCATTAAG
GCTGATGAAG CAAGCGTTGC CAGCGCGCAG CTGCAACTCG ACTGGAGCCG GATTACCGCA
CCAGTCGATG GTCGCGTTGG TCTCAAGCAG GTTGATGTTG GTAACCAAAT CTCCAGTGGT
GATACCACCG GGATCGTGGT GATCACCCAG ACGCATCCTA TCGATTTAGT CTTTACCCTG
CCGGAAAGCG ATATCGCTAC CGTAGTGCAG GCGCAGAAAG CCGGAAAACC GCTGGTGGTA
GAAGCCTGGG ATCGCACCAA CTCGAAGAAA TTAAGTGAAG GCACGCTGTT AAGTCTAGAT
AACCAAATCG ATGCCACTAC CGGTACGATT AAAGTGAAAG CACGCTTTAA TAATCAGGAT
GATGCGCTGT TTCCCAATCA GTTTGTTAAC GCGCGCATGT TAGTCGACAC CGAACAAAAC
GCCGTAGTGA TCCCAACAGC CGCCCTGCAA ATGGGCAATG AAGGCCATTT TGTCTGGGTG
CTGAATAGCG AAAACAAGGT CAGCAAACAT CTGGTGACGC CGGGCATTCA GGACAGTCAG
AAAGTGGTGA TCCGTGCAGG TATTTCTGCG GGCGATCGCG TGGTGACAGA CGGCATTGAT
CGCCTGACCG AAGGGGCGAA AGTGGAAGTG GTGGAAGCCC AGAGCGCCAC TACTCCGGAA
GAGAAAGCCA CCAGCCGCGA ATACGCGAAA AAAGGAGCAC GCTCCTGA
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| Protein sequence | MKGSYKSRWV IVIVVVIAAI AAFWFWQGRN DSRSAAPGAT KQAQQSPAGG RRGMRSGPLA
PVQAATAVEQ AVPRYLTGLG TITAANTVTV RSRVDGQLIA LHFQEGQQVK AGDLLAEIDP
SQFKVALAQA QGQLAKDKAT LANARRDLAR YQQLAKTNLV SRQELDAQQA LVSETEGTIK
ADEASVASAQ LQLDWSRITA PVDGRVGLKQ VDVGNQISSG DTTGIVVITQ THPIDLVFTL
PESDIATVVQ AQKAGKPLVV EAWDRTNSKK LSEGTLLSLD NQIDATTGTI KVKARFNNQD
DALFPNQFVN ARMLVDTEQN AVVIPTAALQ MGNEGHFVWV LNSENKVSKH LVTPGIQDSQ
KVVIRAGISA GDRVVTDGID RLTEGAKVEV VEAQSATTPE EKATSREYAK KGARS
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