| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A2215 |
|---|
| Symbol | |
|---|
| ID | 5592980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 2196710 |
|---|
| End bp | 2197369 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640921343 |
|---|
| Product | von Willebrand factor type A domain-containing protein |
|---|
| Protein accession | YP_001458882 |
|---|
| Protein GI | 157161564 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4245] Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 82 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAC AAATCACGTT TGCCACCAGC GATTTTGCCA GTAACCCGGA ACCACGTTGC
CCCTGCATTT TGCTGCTGGA TGTTTCTGGT TCTATGAACG GTAGACCTAT TAATGAACTT
AACGCCGGAT TGGTTACCTT TCGTGATGAA CTGCTTGCTG ATCCGCTGGC TTTAAAAAGA
GTGGAACTCG GCATTGTGAC GTTCGGCCCG GTGCATGTGG AACAACCCTT TACCAGCGCC
GCTAATTTTT TTCCGCCCAT CCTGTTTGCC CAGGGCGATA CACCAATGGG TGCGGCCATT
ACCAAAGCCC TGGATATGGT AGAGGAGCGG AAACGTGAGT ATCGTGCAAA TGGTATTTCG
TATTATCGCC CGTGGATTTT CCTGATTACC GATGGTGCAC CAACCGATGA GTGGCAGGCT
GCAGCCAACA AAGTGTTTCG GGGGGAAGAA GATAAAAGGT TTGCTTTCTT TTCCATCGGT
GTTCAGGGGG CGGATATGAA GACGCTGGCA CAAATTAGCG TTCGTCAGCC TTTGCCTCTG
CAAGGATTAC AATTCCGTGA ACTGTTTAGC TGGTTATCCA GTTCGCTGCG TTCGGTTTCC
CGCTCCACGC CGGGAACGGA AGTTGTGCTG GAAGCGCCAA AAGGCTGGAC GTCAGTGTGA
|
|---|
| Protein sequence | MSEQITFATS DFASNPEPRC PCILLLDVSG SMNGRPINEL NAGLVTFRDE LLADPLALKR
VELGIVTFGP VHVEQPFTSA ANFFPPILFA QGDTPMGAAI TKALDMVEER KREYRANGIS
YYRPWIFLIT DGAPTDEWQA AANKVFRGEE DKRFAFFSIG VQGADMKTLA QISVRQPLPL
QGLQFRELFS WLSSSLRSVS RSTPGTEVVL EAPKGWTSV
|
|---|
| |