Gene EcHS_A2178 details

Gene Information

• Locus tag: EcHS_A2178
• Symbol: ugd
• ID: 5594708
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: -
• Start bp: 2156840
• End bp: 2158006
• Gene Length: 1167 bp
• Protein Length: 388 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640921311
• Product: UDP-glucose 6-dehydrogenase
• Protein accession: YP_001458850
• Protein GI: 157161532
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1004] Predicted UDP-glucose 6-dehydrogenase
• TIGRFAM ID: [TIGR03026] nucleotide sugar dehydrogenase

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 0.112663
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATTA CTATTTCCGG TACAGGTTAT GTTGGTTTAT CGAACGGTGT CCTGATTGCG 
CAAAACCACG AAGTGGTTGC TCTGGATATC GTACAGGCCA AAGTGGATAT GCTTAACCAG 
AAGATCTCTC CGATTGTGGA TAAAGAGATT CAGGAATATC TGGCAGAAAA ACCGTTAAAT 
TTCCGTGCCA CCACGGACAA GCACGACGCC TATCGTAATG CCGACTACGT GATCATTGCG 
ACGCCGACCG ATTACGATCC CAAAACCAAC TACTTCAACA CCTCTACAGT GGAAGCGGTT 
ATTCGCGATG TCACAGAGAT CAACCCGAAC GCGGTGATGA TCATTAAATC GACCATCCCG 
GTGGGGTTCA CCCGCGACAT CAAAGAACGT TTAGGGATTG ATAATGTTAT TTTCTCTCCT 
GAGTTCCTGC GTGAAGGCCG TGCGCTGTAC GACAACCTGC ACCCATCGCG CATTGTTATT 
GGTGAGCGCT CTGCGCGTGC CGAGCGTTTC GCAGACCTGC TGAAAGAAGG CGCGATTAAG 
CAGGATATCC CGACCCTGTT TACCGACTCC ACTGAAGCGG AAGCGATCAA ACTGTTCGCG 
AACACCTATC TGGCGCTGCG TGTTGCCTAT TTCAATGAGC TCGACAGCTA TGCTGAAAGC 
CAGGGGCTGA ACAGCAAGCA GATTATCGAA GGGGTATGCC TGGATCCGCG TATCGGCAAC 
CACTACAACA ACCCGTCCTT TGGCTATGGC GGCTACTGCC TGCCGAAAGA TACCAAGCAG 
CTGCTGGCGA ACTACGAATC GGTCCCGAAC AATATCATCG CGGCTATCGT GGATGCTAAC 
CGTACCCGTA AAGACTTTAT CGCGGATTCT ATTCTCGCCC GTAAGCCGAA AGTGGTGGGT 
GTGTATCGCC TGATCATGAA GAGTGGTTCG GACAACTTCC GTGCTTCTTC TATTCAGGGC 
ATTATGAAGC GCATCAAGGC GAAAGGTATT CCGGTTATTA TCTATGAACC GGTGATGCAG 
GAAGATGAGT TCTTTAACTC CCGCGTCGTG CGCGACCTGG ATACCTTCAA ACAAGAGGCG 
GATGTGATCA TCTCTAACCG TATGGCGGAA GAGCTGGCGG ATGTGGCGGA CAAGGTATAC 
ACCCGCGATC TGTTTGGTAA CGATTAA 

 

Protein sequence

MKITISGTGY VGLSNGVLIA QNHEVVALDI VQAKVDMLNQ KISPIVDKEI QEYLAEKPLN 
FRATTDKHDA YRNADYVIIA TPTDYDPKTN YFNTSTVEAV IRDVTEINPN AVMIIKSTIP 
VGFTRDIKER LGIDNVIFSP EFLREGRALY DNLHPSRIVI GERSARAERF ADLLKEGAIK 
QDIPTLFTDS TEAEAIKLFA NTYLALRVAY FNELDSYAES QGLNSKQIIE GVCLDPRIGN 
HYNNPSFGYG GYCLPKDTKQ LLANYESVPN NIIAAIVDAN RTRKDFIADS ILARKPKVVG 
VYRLIMKSGS DNFRASSIQG IMKRIKAKGI PVIIYEPVMQ EDEFFNSRVV RDLDTFKQEA 
DVIISNRMAE ELADVADKVY TRDLFGND