Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A2176 |
Symbol | |
ID | 5594546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 2156091 |
End bp | 2156588 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640921309 |
Product | IS1, transposase orfB |
Protein accession | YP_001458848 |
Protein GI | 157161530 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1662] Transposase and inactivated derivatives, IS1 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 0.0703398 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCGCC AGTGCACGCA TTATGGGCGT TGGCCTCAAC ACGGTTTTAC GTCACTTAAA AAACTCAGGC CGCAGTCGGT AACCTCGCGC ATACAACCGG GCAGTGATGT GATTGTCTGC GCTGAAATGG ACGAACAGTG GGGCTACGTC GGTGCTAAAT CACGTCAGCG CTGGCTGTTT TACGCGTATG ACAGGATACG AAGGACGGTT GTGGCGCACG TCTTCGGTGA ACGCACTCTG GCCACACTGG AGCGTCTTCT GAGCCTGCTG TCGGCCTTTG AGGTCGTGGT ATGGATGACG GATGGCTGGC CGCTGTATGA ATCGCGCCTG AAGGGAAAGC TGCACGTTAT CAGCAAGCGT TACACTCAGC GCATTGAGCG ACATAATCTG AGACAACATC TGGCAAGGCT GGGACGGAAG TCACTGTCGT TCTCAAAATC GGTGGAGCTG CATGACAAGG TCATCGGGCA TTATCTGAAC ATAAAACACT ATCAGTAA
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Protein sequence | MSRQCTHYGR WPQHGFTSLK KLRPQSVTSR IQPGSDVIVC AEMDEQWGYV GAKSRQRWLF YAYDRIRRTV VAHVFGERTL ATLERLLSLL SAFEVVVWMT DGWPLYESRL KGKLHVISKR YTQRIERHNL RQHLARLGRK SLSFSKSVEL HDKVIGHYLN IKHYQ
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