Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A2171 |
Symbol | |
ID | 5594949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 2151410 |
End bp | 2152195 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640921304 |
Product | ABC-2 type transporter |
Protein accession | YP_001458843 |
Protein GI | 157161525 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 0.637351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTCAG CGATCTATCG CTACCGTGGC TTTATTATTG ACAGCGTTAA ACGGGACTTT CAGTCCCGTT ACCAAACCAG CTTCTTAGGC GCGGCATGGC TGATTTTACA GCCGATCGCC ATGATTTCCG TCTATACATT AATTTTTTCT GAATTAATGC GTGCCCGCCT GGCTGGCATG GATGGTCCTT TTGCATACAG TATCTACTTG TGTTCTGGGG TGTTAACTTG GGGGCTGTTC ACGGAAATGC TCAACAGTCT GGTCAACGTT TTTCTGACCA ACGCCAATAT TCTTAAGAAG CTCAGCTTTC CGCGGATCTG TTTACCGATT ATCGTCACTG CTTCGGCATT TATTAACTTC CTGATCATTT TTGGTCTGTT CGTGCTGTTT CTGATCGTCA CGGGCAATTT CCCTGGCATG ATTTTCTTTG AAATCATTCC GGTGCTGATC GTCCAGATGC TGTTCACCCT CGGCCTCGGG ATCATTCTCG GGGTACTGAA CGTTTTTGTC CGCGATGTCG GGCAGTTCGT TAATATCCTG CTTCAGTTTT GGTTCTGGTT TACGCCAATT GTCTACGTAT CCAAAACGCT GCCGGAATGG GTTTCTGGTC TGTTGGCGTA TAACCCGATG GCGACCATTA TCGGTTCCTA CCAGAACGTG ATGCTCTATC ACCAGAGCCC TAACTGGATG GCGCTGCTTC CGGTCACAGT GGTGTCGGTC ATTCTGTTTT TATTTGCCTG GCGTTTATTT AAAAAACATG CCGCTGATAT TGTGGACGAG ATTTAA
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Protein sequence | MFSAIYRYRG FIIDSVKRDF QSRYQTSFLG AAWLILQPIA MISVYTLIFS ELMRARLAGM DGPFAYSIYL CSGVLTWGLF TEMLNSLVNV FLTNANILKK LSFPRICLPI IVTASAFINF LIIFGLFVLF LIVTGNFPGM IFFEIIPVLI VQMLFTLGLG IILGVLNVFV RDVGQFVNIL LQFWFWFTPI VYVSKTLPEW VSGLLAYNPM ATIIGSYQNV MLYHQSPNWM ALLPVTVVSV ILFLFAWRLF KKHAADIVDE I
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