Gene EcHS_A2171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A2171 
Symbol 
ID5594949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp2151410 
End bp2152195 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content47% 
IMG OID640921304 
ProductABC-2 type transporter 
Protein accessionYP_001458843 
Protein GI157161525 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value0.637351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTCAG CGATCTATCG CTACCGTGGC TTTATTATTG ACAGCGTTAA ACGGGACTTT 
CAGTCCCGTT ACCAAACCAG CTTCTTAGGC GCGGCATGGC TGATTTTACA GCCGATCGCC
ATGATTTCCG TCTATACATT AATTTTTTCT GAATTAATGC GTGCCCGCCT GGCTGGCATG
GATGGTCCTT TTGCATACAG TATCTACTTG TGTTCTGGGG TGTTAACTTG GGGGCTGTTC
ACGGAAATGC TCAACAGTCT GGTCAACGTT TTTCTGACCA ACGCCAATAT TCTTAAGAAG
CTCAGCTTTC CGCGGATCTG TTTACCGATT ATCGTCACTG CTTCGGCATT TATTAACTTC
CTGATCATTT TTGGTCTGTT CGTGCTGTTT CTGATCGTCA CGGGCAATTT CCCTGGCATG
ATTTTCTTTG AAATCATTCC GGTGCTGATC GTCCAGATGC TGTTCACCCT CGGCCTCGGG
ATCATTCTCG GGGTACTGAA CGTTTTTGTC CGCGATGTCG GGCAGTTCGT TAATATCCTG
CTTCAGTTTT GGTTCTGGTT TACGCCAATT GTCTACGTAT CCAAAACGCT GCCGGAATGG
GTTTCTGGTC TGTTGGCGTA TAACCCGATG GCGACCATTA TCGGTTCCTA CCAGAACGTG
ATGCTCTATC ACCAGAGCCC TAACTGGATG GCGCTGCTTC CGGTCACAGT GGTGTCGGTC
ATTCTGTTTT TATTTGCCTG GCGTTTATTT AAAAAACATG CCGCTGATAT TGTGGACGAG
ATTTAA
 
Protein sequence
MFSAIYRYRG FIIDSVKRDF QSRYQTSFLG AAWLILQPIA MISVYTLIFS ELMRARLAGM 
DGPFAYSIYL CSGVLTWGLF TEMLNSLVNV FLTNANILKK LSFPRICLPI IVTASAFINF
LIIFGLFVLF LIVTGNFPGM IFFEIIPVLI VQMLFTLGLG IILGVLNVFV RDVGQFVNIL
LQFWFWFTPI VYVSKTLPEW VSGLLAYNPM ATIIGSYQNV MLYHQSPNWM ALLPVTVVSV
ILFLFAWRLF KKHAADIVDE I