| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A2072 |
|---|
| Symbol | |
|---|
| ID | 5594119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 2058578 |
|---|
| End bp | 2059582 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640921213 |
|---|
| Product | putative sulfite oxidase subunit YedY |
|---|
| Protein accession | YP_001458757 |
|---|
| Protein GI | 157161439 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2041] Sulfite oxidase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 3.41751e-19 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA ATCAATTTTT AAAAGAATCA GATGTTACGG CCGAGTCGGT ATTCTTTATG
AAGCGTCGGC AGGTGTTAAA AGCACTGGGC ATCAGTGCAG CTGCACTTTC TTTGCCTCAC
GCTGCGCATG CCGATCTGCT TAGCTGGTTT AAAGGGAACG ATCGCCCGCT CGCCCCCGCC
GGAAAACCGC TGGAGTTCAG CAAGCCTGCC GCCTGGCAAA ATAACCTGCC ACTGACGCCA
GTAGATAAAG TCTCCGGTTA TAACAACTTC TATGAATTCG GGCTGGATAA AGCCGATCCC
GCCGCTAATG CTGGTAGCCT GAAAACCGAT CCATGGACAC TGAAAATCAG CGGCGAAGTG
GCAAAACCAT TGACCCTCGA TCACGATGAT TTAACCCGTC GCTTCCCGCT GGAAGAGCGT
ATTTATCGTA TGCGCTGCGT GGAGGCATGG TCGATGGTGG TGCCGTGGAT TGGTTTTCCG
CTGCACAAAT TGCTGGCGCT TGCCGAACCC ACCAGCAATG CGAAGTATGT CGCTTTCGAA
ACAATTTATG CACCGGAACA AATGCCAGGC CAGCAGGACC GCTTTATCGG CGGCGGGCTG
AAATATCCTT ATGTCGAAGG ATTGCGTCTC GACGAAGCAA TGCATCCGCT CACACTGATG
ACCGTGGGTG TTTATGGCAA GGCGTTACCG CCACAAAATG GCGCGCCGGT ACGACTGATT
GTGCCGTGGA AATATGGCTT TAAAGGGATT AAATCGATAG TTAGTATTAA GCTGACCCGC
GAGCGTCCGC CAACCACCTG GAATCTGGCA GCGCCTGACG AATACGGTTT TTACGCCAAC
GTTAATCCGC ATGTTGATCA CCCGCGCTGG TCACAGGCTA CCGAACGATT TATTGGTTCA
GGCGGCATCC TCGATGTTCA GCGCCAGCCA ACGCTACTGT TTAATGGTTA CGCCGACCAG
GTGGCATCGC TGTATCGTGG CCTGGATTTG CGGGAGAATT TCTGA
|
|---|
| Protein sequence | MKKNQFLKES DVTAESVFFM KRRQVLKALG ISAAALSLPH AAHADLLSWF KGNDRPLAPA
GKPLEFSKPA AWQNNLPLTP VDKVSGYNNF YEFGLDKADP AANAGSLKTD PWTLKISGEV
AKPLTLDHDD LTRRFPLEER IYRMRCVEAW SMVVPWIGFP LHKLLALAEP TSNAKYVAFE
TIYAPEQMPG QQDRFIGGGL KYPYVEGLRL DEAMHPLTLM TVGVYGKALP PQNGAPVRLI
VPWKYGFKGI KSIVSIKLTR ERPPTTWNLA APDEYGFYAN VNPHVDHPRW SQATERFIGS
GGILDVQRQP TLLFNGYADQ VASLYRGLDL RENF
|
|---|
| |