Gene EcHS_A2051 details

Gene Information

• Locus tag: EcHS_A2051
• Symbol: rcsA
• ID: 5593778
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 2043708
• End bp: 2044331
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640921195
• Product: colanic acid capsular biosynthesis activation protein A
• Protein accession: YP_001458740
• Protein GI: 157161422
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 4.74459e-16
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAACGA TTATTATGGA TTTATGTAGT TACACCCGAC TAGGTTTAAC CGGGTATCTG 
TTGAGTAGAG GGGTTAAAAA AAGAGAAATC AACGACATTG AAACCGTTGA TGACCTTGCC 
ATAGCTTGTG ATTCACAGCG CCCTTCAGTG GTGTTTATTA ATGAGGACTG TTTCATCCAT 
GATGCTTCTA ACAGTCAGCA CATCAAGCAC ATCATTAATC AACATCCCAA TACGTTATTT 
ATCGTTTTTA TGGCAATTGC CAATGTTCAT TTTGATGAAT ATCTATTGGT CAGAAAAAAT 
TTATTGATCA ATTCTAAATC GATTAAACCG GAATCTCTCG ACGATATCCT TGGCGATATT 
CTGAAAAAAG AGACAACGAT AACCTCGTTT TTAAATATGC CGACGTTATC ATTGAGCCGA 
ACCGAATCGA GTATGTTGCG AATGTGGATG GCAGGTCAGG GAACCATTCA AATCTCTGAC 
CAAATGAATA TCAAAGCCAA GACCGTTTCA TCGCATAAAG GTAATATTAA ACGTAAGATC 
AAAACGCATA ATAAACAGGT TATCTACCAT GTCGTCCGAC TGACGGATAA TGTGACTAAT 
GGTATTTTTG TCAACATGCG CTAA 

 

Protein sequence

MSTIIMDLCS YTRLGLTGYL LSRGVKKREI NDIETVDDLA IACDSQRPSV VFINEDCFIH 
DASNSQHIKH IINQHPNTLF IVFMAIANVH FDEYLLVRKN LLINSKSIKP ESLDDILGDI 
LKKETTITSF LNMPTLSLSR TESSMLRMWM AGQGTIQISD QMNIKAKTVS SHKGNIKRKI 
KTHNKQVIYH VVRLTDNVTN GIFVNMR