| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A2050 |
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| Symbol | fliR |
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| ID | 5595293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 2042633 |
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| End bp | 2043418 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640921194 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_001458739 |
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| Protein GI | 157161421 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0000000000709328 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGCAGG TGACAAGCGA ACAATGGCTA TCCTGGTTAA GCCTCTACTT CTGGCCGTTA
CTGCGCGTGC TGGCGCTCAT TTCTACCGCG CCAATTCTGA GCGAACGCAG CGTGCCGAAA
CGGGTAAAAC TGGGTCTGGC AATGATGATC ACGTTCGCAA TTGCCCCATC ATTACCTGCC
AACGATGTTC CTGTTTTTTC GTTCTTTGCT CTGTGGCTGG CCGTGCAGCA GATCCTGATC
GGCATTGCGC TTGGTTTTAC CATGCAATTT GCCTTTGCCG CTGTGCGAAC CGCTGGCGAA
ATTATCGGCC TGCAAATGGG GCTGTCATTT GCGACGTTTG TCGATCCGGC CAGCCATCTC
AATATGCCCG TTTTAGCGCG TATCATGGAT ATGCTGGCGT TATTGCTGTT CCTGACATTT
AACGGTCATT TATGGTTAAT TTCACTGCTG GTCGATACCT TTCACACCCT GCCAATTGGT
GGCGAACCGT TGAACAGCAA TGCGTTTCTG GCACTCACCA AAGCAGGGAG TTTGATTTTC
CTTAACGGGC TGATGCTGGC GTTACCGCTC ATTACTCTGC TGCTGACCCT GAATCTGGCA
TTAGGTTTAC TGAATCGTAT GGCCCCGCAA TTATCCATTT TTGTTATTGG ATTTCCATTA
ACTCTGACTG TCGGTATCTC TTTAATGGCG GCATTAATGC CGTTAATTGC GTCTTTTTGC
GAACATTTAT TCAGTGAAAT TTTTAATTTG CTGGCTGATA TTATTAGTGA ATTGCCATTA
ATATAA
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| Protein sequence | MLQVTSEQWL SWLSLYFWPL LRVLALISTA PILSERSVPK RVKLGLAMMI TFAIAPSLPA
NDVPVFSFFA LWLAVQQILI GIALGFTMQF AFAAVRTAGE IIGLQMGLSF ATFVDPASHL
NMPVLARIMD MLALLLFLTF NGHLWLISLL VDTFHTLPIG GEPLNSNAFL ALTKAGSLIF
LNGLMLALPL ITLLLTLNLA LGLLNRMAPQ LSIFVIGFPL TLTVGISLMA ALMPLIASFC
EHLFSEIFNL LADIISELPL I
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