Gene EcHS_A2047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A2047 
SymbolfliO 
ID5593929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp2041244 
End bp2041609 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content55% 
IMG OID640921191 
Productflagellar biosynthesis protein FliO 
Protein accessionYP_001458736 
Protein GI157161418 
COG category[N] Cell motility 
COG ID[COG3190] Flagellar biogenesis protein 
TIGRFAM ID[TIGR03500] flagellar biosynthetic protein FliO 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.00124081 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAACC ACGCTACTGT GCAATCTTCC ACGCCGGTTT CTGCTGCGCC ACTGCTGCAG 
GTCAGCGGCG CACTCATCGC CATTATTGCC CTGATCCTCG CTGCTGCCTG GCTGGTAAAA
CGGTTGGGAT TTGCCCCGAA ACGCACTGGC GTTAACGGTC TGAAAATTAG CGCCAGTGCT
TCGCTGGGCG CGCGTGAACG GGTTGTGGTG GTCGATGTGG AAGATGCACG GCTGGTGCTC
GGCGTTACCG CAGGGCAAAT CAATCTGCTG CATAAACTTC CCCCTTCAGC ACCAACAGAA
GAGATACCGC AGACCGATTT TCAGTCGGTC ATGAAAAATT TGCTTAAGCG TAGTGGGAGA
TCCTGA
 
Protein sequence
MNNHATVQSS TPVSAAPLLQ VSGALIAIIA LILAAAWLVK RLGFAPKRTG VNGLKISASA 
SLGARERVVV VDVEDARLVL GVTAGQINLL HKLPPSAPTE EIPQTDFQSV MKNLLKRSGR
S