Gene EcHS_A2046 details

Gene Information

• Locus tag: EcHS_A2046
• Symbol: fliN
• ID: 5593928
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 2040828
• End bp: 2041241
• Gene Length: 414 bp
• Protein Length: 137 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 640921190
• Product: flagellar motor switch protein FliN
• Protein accession: YP_001458735
• Protein GI: 157161417
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1886] Flagellar motor switch/type III secretory pathway protein
• TIGRFAM ID: [TIGR02480] flagellar motor switch protein FliN

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 0.00538012
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGACA TGAATAATCC GGCCGATGAC AACAACGGCG CAATGGACGA TCTGTGGGCT 
GAAGCGTTGA GCGAACAAAA ATCAACCAGC AGCAAAAGCG CTGCCGACGC GGTGTTCCAG 
CAATTTGGCG GTGGTGATGT CAGCGGAACG TTGCAGGATA TCGACCTGAT AATGGATATT 
CCGGTCAAGC TGACCGTCGA GCTGGGCCGT ACGCGGATGA CCATCAAAGA GCTGTTGCGT 
CTGACGCAAG GGTCCGTCGT GGCGCTGGAC GGTCTAGCGG GCGAACCACT GGATATTCTG 
ATCAACGGTT ATTTAATCGC CCAGGGCGAA GTGGTGGTCG TTGCCGATAA ATATGGCGTG 
CGGATCACCG ATATCATTAC TCCGTCTGAG CGAATGCGTC GCCTGAGCCG TTAG 

 

Protein sequence

MSDMNNPADD NNGAMDDLWA EALSEQKSTS SKSAADAVFQ QFGGGDVSGT LQDIDLIMDI 
PVKLTVELGR TRMTIKELLR LTQGSVVALD GLAGEPLDIL INGYLIAQGE VVVVADKYGV 
RITDIITPSE RMRRLSR