Gene EcHS_A2011 details

Gene Information

• Locus tag: EcHS_A2011
• Symbol: uvrC
• ID: 5593577
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: -
• Start bp: 2012501
• End bp: 2014333
• Gene Length: 1833 bp
• Protein Length: 610 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 640921157
• Product: excinuclease ABC subunit C
• Protein accession: YP_001458702
• Protein GI: 157161384
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.000000000000678771
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGTGATC AGTTTGACGC AAAAGCGTTT TTAAAAACCG TAACCAGCCA GCCAGGCGTT 
TATCGCATGT ACGATGCTGG TGGTACGGTT ATCTATGTCG GCAAAGCGAA AGACCTGAAA 
AAACGGCTTT CCAGCTATTT CCGTAGCAAC CTCGCTTCGC GCAAAACCGA AGCGCTGGTC 
GCCCAGATCC AGCAAATTGA TGTAACGGTT ACTCATACAG AAACCGAAGC GCTGTTGCTG 
GAACACAACT ACATCAAACT CTATCAGCCG CGTTACAACG TTTTGCTACG CGATGATAAA 
TCTTATCCTT TTATCTTCCT GAGTGGCGAT ACCCACCCGC GTCTGGCGAT GCATCGTGGT 
GCGAAGCATG CCAAAGGTGA ATATTTCGGC CCGTTCCCGA ATGGCTATGC CGTACGTGAA 
ACACTGGCGC TACTGCAAAA GATTTTCCCC ATTCGCCAGT GCGAAAATAG TGTTTATCGC 
AATCGCTCGC GTCCGTGTCT GCAATATCAG ATAGGGCGCT GTCTGGGACC GTGCGTTGAA 
GGACTGGTGA GTGAAGAAGA ATACGCTCAG CAGGTCGAGT ATGTGCGCCT GTTTTTGTCT 
GGCAAAGATG ATCAGGTGCT TACGCAACTC ATTAGTCGTA TGGAAACTGC CAGCCAGAAT 
CTGGAGTTTG AAGAAGCGGC ACGTATTCGC GACCAAATTC AGGCGGTGCG ACGCGTCACC 
GAAAAACAAT TCGTTTCCAA TACCGGCGAC GACCTCGACG TTATTGGTGT GGCGTTCGAT 
GCGGGCATGG CTTGTGTCCA CGTATTGTTC ATTCGTCAGG GCAAAGTGCT CGGCAGCCGC 
AGCTATTTCC CGAAAGTGCC TGGCGGTACG GAACTGAGCG AGGTGGTAGA AACCTTCGTA 
GGTCAGTTCT ATTTACAAGG CAGCCAGATG CGCACCTTAC CGGGTGAGAT CCTGCTCGAT 
TTTAATCTTA GCGATAAAAC GCTGCTCGCC GATTCCCTTT CAGAACTGGC GGGACGCAAG 
ATTAATGTTC AAACCAAACC TCGCGGCGAT CGGGCGCGTT ATCTGAAACT CGCGCGCACC 
AATGCGGCGA CGGCCTTAAC CAGCAAACTT TCGCAGCAAT CTACCGTTCA CCAGCGGCTT 
ACAGCACTTG CCAGTGTGTT GAAATTGCCG GAAGTGAAGC GGATGGAGTG CTTTGACATC 
AGCCATACCA TGGGTGAACA AACCGTCGCT TCCTGTGTGG TGTTTGATGC TAACGGCCCG 
CTGCGTGCGG AGTATCGGCG CTATAACATT ACTGGCATCA CGCCGGGCGA TGATTATGCG 
GCGATGAATC AGGTGCTGCG TCGGCGTTAT GGTAAAGCCA TCGACGACAG TAAGATCCCG 
GATGTGATAC TTATCGACGG CGGCAAAGGC CAGCTTGCGC AGGCGAAAAA TGTCTTCGCC 
GAACTGGATG TCTCATGGGA TAAAAATCAT CCGCTGCTAC TTGGCGTTGC CAAAGGAGCA 
GATCGTAAGG CTGGGCTGGA AACGCTGTTC TTTGAGCCGG AAGGTGAGGG ATTCAGTTTG 
CCGCCAGATT CTCCCGCGCT GCATGTTATC CAGCATATTC GCGATGAATC ACATGATCAC 
GCGATTGGCG GGCACCGTAA AAAACGGGCG AAGGTCAAAA ATACCAGTTC CCTGGAAACC 
ATTGAAGGCG TCGGGCCAAA ACGCCGGCAA ATGTTGTTGA AATATATGGG CGGTTTGCAA 
GGTTTACGTA ACGCCAGCGT CGAGGAAATT GCAAAAGTGC CGGGTATTTC GCAAGGTCTG 
GCAGAAAAGA TCTTCTGGTC GTTGAAACAT TGA 

 

Protein sequence

MSDQFDAKAF LKTVTSQPGV YRMYDAGGTV IYVGKAKDLK KRLSSYFRSN LASRKTEALV 
AQIQQIDVTV THTETEALLL EHNYIKLYQP RYNVLLRDDK SYPFIFLSGD THPRLAMHRG 
AKHAKGEYFG PFPNGYAVRE TLALLQKIFP IRQCENSVYR NRSRPCLQYQ IGRCLGPCVE 
GLVSEEEYAQ QVEYVRLFLS GKDDQVLTQL ISRMETASQN LEFEEAARIR DQIQAVRRVT 
EKQFVSNTGD DLDVIGVAFD AGMACVHVLF IRQGKVLGSR SYFPKVPGGT ELSEVVETFV 
GQFYLQGSQM RTLPGEILLD FNLSDKTLLA DSLSELAGRK INVQTKPRGD RARYLKLART 
NAATALTSKL SQQSTVHQRL TALASVLKLP EVKRMECFDI SHTMGEQTVA SCVVFDANGP 
LRAEYRRYNI TGITPGDDYA AMNQVLRRRY GKAIDDSKIP DVILIDGGKG QLAQAKNVFA 
ELDVSWDKNH PLLLGVAKGA DRKAGLETLF FEPEGEGFSL PPDSPALHVI QHIRDESHDH 
AIGGHRKKRA KVKNTSSLET IEGVGPKRRQ MLLKYMGGLQ GLRNASVEEI AKVPGISQGL 
AEKIFWSLKH