Gene EcHS_A2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A2006 
Symbol 
ID5593525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp2010581 
End bp2011246 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content53% 
IMG OID640921152 
Producthypothetical protein 
Protein accessionYP_001458700 
Protein GI157161382 
COG category[R] General function prediction only 
COG ID[COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA 
TIGRFAM ID[TIGR02292] yecA family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000000852324 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACGG GACCGTTAAA CGAAAGTGAG TTGGAATGGC TGGACGATAT TCTGACCAAA 
TACAACACTG ACCACGCCAT CCTTGATGTG GCGGAGCTGG ACGGTTTATT GACGGCGGTG
TTGAGTTCTC CGCAAGAGAT TGAACCGGAA CAGTGGCTGG TTGCCGTGTG GGGTGGGGCT
GACTATGTGC CGCGCTGGGC GTCAGAGAAA GAGATGACGC GCTTTATGAA CCTGGCTTTT
CAACATATGG CCGATACCGC AGAGCGTCTG AACGAATTCC CGGAGCAGTT TGAGCCGTTA
TTCGGCTTGC GAGAAGTTGA TGGCAGCGAG CTGACGATTG TTGAGGAGTG GTGCTTTGGC
TATATGCGGG GCGTGGCACT TTCTGACTGG TCAACGTTGC CCGATTCGTT AAAACCAGCG
CTGGAGGCGA TTGCGCTGCA CGGTACTGAG GAAAACTTCG AGCGGGTAGA GAAAATGTCG
CCAGAAGCGT TTGAAGAGAG CGTAGATGCC ATTCGACTGG CGGCGCTTGA TCTACATGCG
TACTGGATGG CGCATCCGCA GGAAAAAGCT GTTCAGCAAC CGATCAAAGC AGAAGAGAAA
CCGGGGCGTA ACGATCCTTG CCCGTGCGGT AGTGGTAAGA AATTTAAGCA GTGCTGCCTG
CATTAA
 
Protein sequence
MKTGPLNESE LEWLDDILTK YNTDHAILDV AELDGLLTAV LSSPQEIEPE QWLVAVWGGA 
DYVPRWASEK EMTRFMNLAF QHMADTAERL NEFPEQFEPL FGLREVDGSE LTIVEEWCFG
YMRGVALSDW STLPDSLKPA LEAIALHGTE ENFERVEKMS PEAFEESVDA IRLAALDLHA
YWMAHPQEKA VQQPIKAEEK PGRNDPCPCG SGKKFKQCCL H