Gene EcHS_A1972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1972 
Symbol 
ID5592843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1981143 
End bp1981631 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content38% 
IMG OID640921117 
Producthypothetical protein 
Protein accessionYP_001458666 
Protein GI157161348 
COG category[S] Function unknown 
COG ID[COG3755] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones78 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTAAAT TTCTTGTATT AACATTAGGC ATTATCTCTT GCCAGGTTTA CGCAGAAGAT 
ACGCTTATAG TAAACGACCA TGACATTTCA GCCATCAAAG ATTGTTGGCA AAAAAATTCA
GATGATGATA GTGACATTAA CGTGATCAAA TCATGCCTGC GACAAGAATA CAATCTCGTC
GATGCGCAAT TAAATAAAGC CTATGGTGAA GCTTATCGTT ATATAGAACA AGTGCCACGC
ACAGGTGTAA AAAAACCTGA TACCGAACAA CTTAACTTGC TTAAAAAATC ACAGCGAGCC
TGGCTGGATT TTAGGGACAA AGAATGTGAA TTAATCCTTT CAAATGAGGA CGTTCAGGAT
TTAAGTGACC CTTATTCTGA ATCAGAATGG CTCTCATGTA TGATCATACA GACCAATACG
CGAACTCGCC AGTTGCAGCT ATACCGTAAC TCTGAAGATT TTTATCCAAG CCCTTTGACA
AGAGGATAA
 
Protein sequence
MFKFLVLTLG IISCQVYAED TLIVNDHDIS AIKDCWQKNS DDDSDINVIK SCLRQEYNLV 
DAQLNKAYGE AYRYIEQVPR TGVKKPDTEQ LNLLKKSQRA WLDFRDKECE LILSNEDVQD
LSDPYSESEW LSCMIIQTNT RTRQLQLYRN SEDFYPSPLT RG