Gene EcHS_A1958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1958 
SymbolntpA 
ID5595175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1967351 
End bp1967803 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content53% 
IMG OID640921103 
ProductdATP pyrophosphohydrolase 
Protein accessionYP_001458652 
Protein GI157161334 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value0.683601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGGATA AAGTGTATAA GCGTCCCGTT TCGATCTTAG TGGTCATCTA CGCACAAGAT 
ACGAAACGGG TGCTGATGTT GCAGCGGCGT GACGATCCCG ATTTCTGGCA GTCGGTAACC
GGCAGCGTGG AAGAGGGTGA AACCGCGCCG CAAGCTGCCA TGCGCGAAGT AAAGGAAGAG
GTCACCATTG ATGTTGTCGC TGAACAACTG ACCTTAATTG ACTGTCAGCG CACGGTAGAG
TTTGAAATTT TTTCACATTT ACGTCATCGC TATGCGCCGG GCGTGACGCG TAATACGGAA
TCATGGTTCT GTCTTGCGCT TCCGCACGAG CGGCAGATCG TTTTCACTGA ACATCTGGCT
TACAAGTGGC TTGATGCGCC TGCTGCGGCG GCGCTCACTA AGTCCTGGAG CAACCGGCAG
GCGATTGAAC AGTTTGTAAT TAACGCTGCC TGA
 
Protein sequence
MKDKVYKRPV SILVVIYAQD TKRVLMLQRR DDPDFWQSVT GSVEEGETAP QAAMREVKEE 
VTIDVVAEQL TLIDCQRTVE FEIFSHLRHR YAPGVTRNTE SWFCLALPHE RQIVFTEHLA
YKWLDAPAAA ALTKSWSNRQ AIEQFVINAA