Gene EcHS_A1954 details

Gene Information

• Locus tag: EcHS_A1954
• Symbol: ruvA
• ID: 5595464
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: -
• Start bp: 1964536
• End bp: 1965147
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 640921099
• Product: Holliday junction DNA helicase RuvA
• Protein accession: YP_001458648
• Protein GI: 157161330
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: 39
• Plasmid unclonability p-value: 0.165373
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATAGGCA GACTCAGAGG CATCATCATT GAAAAACAAC CCCCGCTGGT GTTAATTGAA 
GTGGGCGGCG TAGGCTATGA AGTGCATATG CCGATGACCT GTTTTTATGA ACTCCCTGAA 
GCGGGACAGG AAGCGATCGT TTTCACCCAC TTTGTGGTGC GTGAAGACGC GCAGCTGCTG 
TACGGTTTTA ACAATAAACA AGAGCGCACG TTGTTCAAAG AGTTGATCAA AACCAACGGC 
GTCGGCCCGA AGTTGGCGCT GGCGATCCTC TCCGGAATGT CAGCGCAGCA GTTCGTTAAT 
GCCGTTGAGC GTGAAGAAGT GGGGGCGCTG GTGAAACTGC CGGGTATTGG CAAAAAAACC 
GCCGAACGCT TGATTGTTGA AATGAAAGAC CGATTTAAAG GTCTGCATGG CGATCTCTTT 
ACGCCAGCCG CCGATCTGGT GCTCACGTCG CCTGCCAGCC CGGCAACCAA CGATGCTGAA 
CAGGAAGCGG TTGCTGCGCT GGTGGCGCTG GGCTATAAAC CACAAGAAGC CAGCCGCATG 
GTGAGCAAAA TCGCTCGCCC TGACGCCAGC AGTGAAACAT TAATTCGCGA AGCCCTACGC 
GCCGCGTTAT GA 

 

Protein sequence

MIGRLRGIII EKQPPLVLIE VGGVGYEVHM PMTCFYELPE AGQEAIVFTH FVVREDAQLL 
YGFNNKQERT LFKELIKTNG VGPKLALAIL SGMSAQQFVN AVEREEVGAL VKLPGIGKKT 
AERLIVEMKD RFKGLHGDLF TPAADLVLTS PASPATNDAE QEAVAALVAL GYKPQEASRM 
VSKIARPDAS SETLIREALR AAL