| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1950 |
|---|
| Symbol | znuC |
|---|
| ID | 5593783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 1961639 |
|---|
| End bp | 1962394 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640921096 |
|---|
| Product | high-affinity zinc transporter ATPase |
|---|
| Protein accession | YP_001458645 |
|---|
| Protein GI | 157161327 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.00957136 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAGTC TGGTTTCCCT GGAAAATGTC TCGGTTTCTT TTGGCCAACG CCGCGTCCTC
TCTGATGTGT CGCTGGAACT TAAACCTGGA AAAATTTTGA CTTTACTTGG GCCAAATGGC
GCAGGTAAGT CGACACTGGT ACGGGTAGTG CTCGGGCTGG TAACACCCGA TGAAGGGGTT
ATCAAGCGCA ACGGAAAACT GCGCATCGGC TATGTACCGC AGAAGCTGTA TCTCGACACC
ACGTTGCCAC TGACCGTAAA CCGTTTTTTA CGCTTACGCC CTGGTACACA TAAAGAAGAT
ATTTTGCCTG CACTGAAACG TGTTCATGCC GGGCACCTGA TTAACGCACC GATGCAAAAG
CTCTCTGGTG GCGAAACGCA GCGTGTACTG TTAGCGCGAG CATTGTTAAA TCGCCCGCAA
TTATTAGTGC TGGATGAACC CACTCAAGGC GTGGATGTAA ATGGCCAGGT GGCGTTATAT
GACCTTATTG ACCAACTGCG TCGTGAACTG GATTGTGGCG TTTTAATGGT TTCTCACGAT
CTGCATCTGG TGATGGCAAA AACCGATGAA GTGCTGTGCC TGAATCACCA CATTTGTTGT
TCCGGCACAC CGGAAGTTGT TTCCCTGCAT CCGGAGTTTA TTTCAATGTT TGGTCCTCGT
GGTGCTGAAC AACTGGGTAT CTATCGCCAT CATCATAACC ATCGTCACGA TTTACAGGGA
CGAATTGTTT TGCGTCGGGG AAATGATCGC TCATGA
|
|---|
| Protein sequence | MTSLVSLENV SVSFGQRRVL SDVSLELKPG KILTLLGPNG AGKSTLVRVV LGLVTPDEGV
IKRNGKLRIG YVPQKLYLDT TLPLTVNRFL RLRPGTHKED ILPALKRVHA GHLINAPMQK
LSGGETQRVL LARALLNRPQ LLVLDEPTQG VDVNGQVALY DLIDQLRREL DCGVLMVSHD
LHLVMAKTDE VLCLNHHICC SGTPEVVSLH PEFISMFGPR GAEQLGIYRH HHNHRHDLQG
RIVLRRGNDR S
|
|---|
| |