Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A1925 |
Symbol | |
ID | 5592629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 1936481 |
End bp | 1939120 |
Gene Length | 2640 bp |
Protein Length | 879 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640921068 |
Product | mce-related protein |
Protein accession | YP_001458619 |
Protein GI | 157161301 |
COG category | [R] General function prediction only |
COG ID | [COG3008] Paraquat-inducible protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.00368027 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACATGA GTCAGGAAAC GCCCGCTTCG ACGACTGAAG CGCAGATTAA AAATAAACGC CGTATCTCAC CTTTCTGGCT GCTGCCTTTC ATCGCGCTAA TGATTGCCGG TTGGCTGATT TGGGACAGTT ATCAGGACCG GGGTAATACC GTCACCATCG ACTTTATGTC GGCGGATGGT ATTGTTCCGG GCCGTACGCC TGTTCGTTAT CAGGGCGTTG AAGTCGGAAC AGTGCAGGAT ATCAGCCTCA GCGACGATCT TCGTAAGATT GAAGTCAAGG TCAGCATCAA GTCCGATATG AAAGATGCGC TGCGCGAAGA GACTCAGTTC TGGCTGGTGA CGCCAAAAGC ATCGTTGGCA GGTGTCTCCG GGCTGGACGC CCTCGTCGGT GGTAACTATA TCGGCATGAT GCCGGGTAAA GGTAAAGAGC AGGATCACTT TGTCGCACTC GATACCCAAC CGAAATATCG GCTGGACAAT GGCGATCTGA TGATCCACCT GCAAGCCCCC GATCTCGGTT CGCTGAACAG CGGTTCATTG GTCTATTTCC GCAAGATCCC GGTGGGAAAA GTCTACGACT ATGCCATCAA TCCCAACAAG CAAGGCGTGG TGATTGATGT CCTGATCGAG CGGCGTTTTA CCGACCTGGT GAAAAAAGGT AGCCGTTTCT GGAACGTTTC CGGCGTTGAT GCCAACGTCA GTATCAGTGG CGCGAAGGTG AAACTGGAAA GTCTGGCGGC ACTGGTTAAC GGTGCGATTG CCTTCGATTC ACCAGAAGAG TCGAAACCTG CCGAGGCGGA AGATACCTTT GGTCTGTATG AAGATCTGGC CCACAGCCAG CGTGGCGTAA TAATAAAACT GGAACTGCCG AGTGGGGCAG GATTAACCGC CGACTCGACG CCGTTAATGT ATCAGGGGCT GGAAGTCGGA CAGCTGACTA AACTGGATTT AAATCCTGGT GGTAAAGTCA CCGGAGAAAT GACCGTTGAT CCCAGCGTCG TTACGCTGTT ACGGGAAAAT ACCCGCATCG AATTACGCAA CCCGAAATTA TCCCTTAGCG ATGCCAATCT CAGCGCCCTG CTGACTGGCA AAACCTTCGA GTTGGTACCC GGCGATGGCG AGCCACGCAA AGAGTTCGTT GTTGTGCCAG GCGAAAAAGC ACTGCTGCAT GAACCTGATG TTCTGACGCT GACCCTGACC GCACCGGAAA GTTACGGTAT TGATGCGGGT CAGCCGCTCA TTCTTCACGG CGTGCAGGTA GGCCAGGTTA TCGATCGTAA ACTCACCAGC AAAGGCGTCA CCTTTACCGT CGCCATCGAG CCTCAGCATC GAGAACTGGT AAAAGGCGAT AGCAAATTTG TCGTCAACAG CCGTGTCGAC GTGAAGGTGG GGCTGGATGG CGTTGAGTTT CTCGGTGCCA GCGCCTCAGA ATGGATTAAC GGCGGGATAC GTATTCTGCC GGGCGATAAA GGCGAGATGA AAGCCAGCTA TCCACTGTAT GCCAATCTGG AAAAAGCGCT GGAGAACAGC CTTAGCGATT TACCCACCAC AACCGTGAGT TTGAGTGCAG AGACGCTGCC GGATGTGCAG GCAGGATCGG TAGTGCTCTA CCGTAAATTT GAAGTTGGTG AAGTTATTAC CGTCCGTCCG CGAGCTAACG CGTTTGATAT CGATCTGCAT ATTAAGCCGG AGTATCGCAA CCTTCTGACC AGCAATAGCG TGTTCTGGGC AGAAGGCGGG GCGAAAGTTC AGCTGAATGG TAGTGGCCTG ACCGTACAGG CATCCCCGCT CTCCAGAGCA TTAAAGGGAG CCATTAGCTT CGATAACCTC AGCGGTGCCA GCGCCAGTCA GCGTAAAGGC GACAAACGAA TTCTGTATGC TTCCGAAACA GCGGCCCGTG CGGTTGGTGG GCAGATTACG CTTCACGCTT TCGATGCCGG AAAACTGGCG GTCGGGATGC CAATTCGCTA TCTCGGTATT GATATCGGGC AAATCCAGAC GCTGGATCTG ATTACCGCGC GCAATGAAGT ACAGGCAAAG GCGGTGCTCT ATCCGGAATA TGTCCAGACC TTTGCTCGCG GTGGTACGCG CTTCTCAGTG GTCACACCGC AAATTTCGGC AGCTGGCGTT GAGCATCTTG ATACTATCCT CCAGCCGTAT ATCAACGTCG AACCAGGCCG GGGCAATCCT CGCCGCGACT TTGAATTACA AGAGGCCACC ATTACTGATT CGCGTTACCT GGATGGCTTA AGCATTATTG TTGAAGCGCC GGAAGCCGGT TCGTTAGGCA TCGGTACGCC TGTGCTGTTC CGTGGTCTGG AAGTCGGTAC GGTTACAGGA ATGACGCTGG GGACATTGTC AGATCGCGTG ATGATTGCGA TGCGCATCAG TAAACGCTAT CAACACCTGG TGCGTAACAA TTCCGTCTTC TGGTTGGCAT CGGGTTACAG TCTGGACTTT GGTCTGACGG GCGGCGTAGT GAAAACCGGC ACCTTTAACC AGTTTATCCG TGGCGGCATC GCCTTCGCCA CGCCTCCGGG GACGCCACTG GCACCGAAAG CCCAGGAAGG CAAGCACTTC CTGTTGCAGG AAAGTGAACC GAAAGAGTGG CGTGAATGGG GTACTGCGCT TCCCAAATAA
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Protein sequence | MHMSQETPAS TTEAQIKNKR RISPFWLLPF IALMIAGWLI WDSYQDRGNT VTIDFMSADG IVPGRTPVRY QGVEVGTVQD ISLSDDLRKI EVKVSIKSDM KDALREETQF WLVTPKASLA GVSGLDALVG GNYIGMMPGK GKEQDHFVAL DTQPKYRLDN GDLMIHLQAP DLGSLNSGSL VYFRKIPVGK VYDYAINPNK QGVVIDVLIE RRFTDLVKKG SRFWNVSGVD ANVSISGAKV KLESLAALVN GAIAFDSPEE SKPAEAEDTF GLYEDLAHSQ RGVIIKLELP SGAGLTADST PLMYQGLEVG QLTKLDLNPG GKVTGEMTVD PSVVTLLREN TRIELRNPKL SLSDANLSAL LTGKTFELVP GDGEPRKEFV VVPGEKALLH EPDVLTLTLT APESYGIDAG QPLILHGVQV GQVIDRKLTS KGVTFTVAIE PQHRELVKGD SKFVVNSRVD VKVGLDGVEF LGASASEWIN GGIRILPGDK GEMKASYPLY ANLEKALENS LSDLPTTTVS LSAETLPDVQ AGSVVLYRKF EVGEVITVRP RANAFDIDLH IKPEYRNLLT SNSVFWAEGG AKVQLNGSGL TVQASPLSRA LKGAISFDNL SGASASQRKG DKRILYASET AARAVGGQIT LHAFDAGKLA VGMPIRYLGI DIGQIQTLDL ITARNEVQAK AVLYPEYVQT FARGGTRFSV VTPQISAAGV EHLDTILQPY INVEPGRGNP RRDFELQEAT ITDSRYLDGL SIIVEAPEAG SLGIGTPVLF RGLEVGTVTG MTLGTLSDRV MIAMRISKRY QHLVRNNSVF WLASGYSLDF GLTGGVVKTG TFNQFIRGGI AFATPPGTPL APKAQEGKHF LLQESEPKEW REWGTALPK
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