Gene EcHS_A1925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1925 
Symbol 
ID5592629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1936481 
End bp1939120 
Gene Length2640 bp 
Protein Length879 aa 
Translation table11 
GC content54% 
IMG OID640921068 
Productmce-related protein 
Protein accessionYP_001458619 
Protein GI157161301 
COG category[R] General function prediction only 
COG ID[COG3008] Paraquat-inducible protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00368027 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACATGA GTCAGGAAAC GCCCGCTTCG ACGACTGAAG CGCAGATTAA AAATAAACGC 
CGTATCTCAC CTTTCTGGCT GCTGCCTTTC ATCGCGCTAA TGATTGCCGG TTGGCTGATT
TGGGACAGTT ATCAGGACCG GGGTAATACC GTCACCATCG ACTTTATGTC GGCGGATGGT
ATTGTTCCGG GCCGTACGCC TGTTCGTTAT CAGGGCGTTG AAGTCGGAAC AGTGCAGGAT
ATCAGCCTCA GCGACGATCT TCGTAAGATT GAAGTCAAGG TCAGCATCAA GTCCGATATG
AAAGATGCGC TGCGCGAAGA GACTCAGTTC TGGCTGGTGA CGCCAAAAGC ATCGTTGGCA
GGTGTCTCCG GGCTGGACGC CCTCGTCGGT GGTAACTATA TCGGCATGAT GCCGGGTAAA
GGTAAAGAGC AGGATCACTT TGTCGCACTC GATACCCAAC CGAAATATCG GCTGGACAAT
GGCGATCTGA TGATCCACCT GCAAGCCCCC GATCTCGGTT CGCTGAACAG CGGTTCATTG
GTCTATTTCC GCAAGATCCC GGTGGGAAAA GTCTACGACT ATGCCATCAA TCCCAACAAG
CAAGGCGTGG TGATTGATGT CCTGATCGAG CGGCGTTTTA CCGACCTGGT GAAAAAAGGT
AGCCGTTTCT GGAACGTTTC CGGCGTTGAT GCCAACGTCA GTATCAGTGG CGCGAAGGTG
AAACTGGAAA GTCTGGCGGC ACTGGTTAAC GGTGCGATTG CCTTCGATTC ACCAGAAGAG
TCGAAACCTG CCGAGGCGGA AGATACCTTT GGTCTGTATG AAGATCTGGC CCACAGCCAG
CGTGGCGTAA TAATAAAACT GGAACTGCCG AGTGGGGCAG GATTAACCGC CGACTCGACG
CCGTTAATGT ATCAGGGGCT GGAAGTCGGA CAGCTGACTA AACTGGATTT AAATCCTGGT
GGTAAAGTCA CCGGAGAAAT GACCGTTGAT CCCAGCGTCG TTACGCTGTT ACGGGAAAAT
ACCCGCATCG AATTACGCAA CCCGAAATTA TCCCTTAGCG ATGCCAATCT CAGCGCCCTG
CTGACTGGCA AAACCTTCGA GTTGGTACCC GGCGATGGCG AGCCACGCAA AGAGTTCGTT
GTTGTGCCAG GCGAAAAAGC ACTGCTGCAT GAACCTGATG TTCTGACGCT GACCCTGACC
GCACCGGAAA GTTACGGTAT TGATGCGGGT CAGCCGCTCA TTCTTCACGG CGTGCAGGTA
GGCCAGGTTA TCGATCGTAA ACTCACCAGC AAAGGCGTCA CCTTTACCGT CGCCATCGAG
CCTCAGCATC GAGAACTGGT AAAAGGCGAT AGCAAATTTG TCGTCAACAG CCGTGTCGAC
GTGAAGGTGG GGCTGGATGG CGTTGAGTTT CTCGGTGCCA GCGCCTCAGA ATGGATTAAC
GGCGGGATAC GTATTCTGCC GGGCGATAAA GGCGAGATGA AAGCCAGCTA TCCACTGTAT
GCCAATCTGG AAAAAGCGCT GGAGAACAGC CTTAGCGATT TACCCACCAC AACCGTGAGT
TTGAGTGCAG AGACGCTGCC GGATGTGCAG GCAGGATCGG TAGTGCTCTA CCGTAAATTT
GAAGTTGGTG AAGTTATTAC CGTCCGTCCG CGAGCTAACG CGTTTGATAT CGATCTGCAT
ATTAAGCCGG AGTATCGCAA CCTTCTGACC AGCAATAGCG TGTTCTGGGC AGAAGGCGGG
GCGAAAGTTC AGCTGAATGG TAGTGGCCTG ACCGTACAGG CATCCCCGCT CTCCAGAGCA
TTAAAGGGAG CCATTAGCTT CGATAACCTC AGCGGTGCCA GCGCCAGTCA GCGTAAAGGC
GACAAACGAA TTCTGTATGC TTCCGAAACA GCGGCCCGTG CGGTTGGTGG GCAGATTACG
CTTCACGCTT TCGATGCCGG AAAACTGGCG GTCGGGATGC CAATTCGCTA TCTCGGTATT
GATATCGGGC AAATCCAGAC GCTGGATCTG ATTACCGCGC GCAATGAAGT ACAGGCAAAG
GCGGTGCTCT ATCCGGAATA TGTCCAGACC TTTGCTCGCG GTGGTACGCG CTTCTCAGTG
GTCACACCGC AAATTTCGGC AGCTGGCGTT GAGCATCTTG ATACTATCCT CCAGCCGTAT
ATCAACGTCG AACCAGGCCG GGGCAATCCT CGCCGCGACT TTGAATTACA AGAGGCCACC
ATTACTGATT CGCGTTACCT GGATGGCTTA AGCATTATTG TTGAAGCGCC GGAAGCCGGT
TCGTTAGGCA TCGGTACGCC TGTGCTGTTC CGTGGTCTGG AAGTCGGTAC GGTTACAGGA
ATGACGCTGG GGACATTGTC AGATCGCGTG ATGATTGCGA TGCGCATCAG TAAACGCTAT
CAACACCTGG TGCGTAACAA TTCCGTCTTC TGGTTGGCAT CGGGTTACAG TCTGGACTTT
GGTCTGACGG GCGGCGTAGT GAAAACCGGC ACCTTTAACC AGTTTATCCG TGGCGGCATC
GCCTTCGCCA CGCCTCCGGG GACGCCACTG GCACCGAAAG CCCAGGAAGG CAAGCACTTC
CTGTTGCAGG AAAGTGAACC GAAAGAGTGG CGTGAATGGG GTACTGCGCT TCCCAAATAA
 
Protein sequence
MHMSQETPAS TTEAQIKNKR RISPFWLLPF IALMIAGWLI WDSYQDRGNT VTIDFMSADG 
IVPGRTPVRY QGVEVGTVQD ISLSDDLRKI EVKVSIKSDM KDALREETQF WLVTPKASLA
GVSGLDALVG GNYIGMMPGK GKEQDHFVAL DTQPKYRLDN GDLMIHLQAP DLGSLNSGSL
VYFRKIPVGK VYDYAINPNK QGVVIDVLIE RRFTDLVKKG SRFWNVSGVD ANVSISGAKV
KLESLAALVN GAIAFDSPEE SKPAEAEDTF GLYEDLAHSQ RGVIIKLELP SGAGLTADST
PLMYQGLEVG QLTKLDLNPG GKVTGEMTVD PSVVTLLREN TRIELRNPKL SLSDANLSAL
LTGKTFELVP GDGEPRKEFV VVPGEKALLH EPDVLTLTLT APESYGIDAG QPLILHGVQV
GQVIDRKLTS KGVTFTVAIE PQHRELVKGD SKFVVNSRVD VKVGLDGVEF LGASASEWIN
GGIRILPGDK GEMKASYPLY ANLEKALENS LSDLPTTTVS LSAETLPDVQ AGSVVLYRKF
EVGEVITVRP RANAFDIDLH IKPEYRNLLT SNSVFWAEGG AKVQLNGSGL TVQASPLSRA
LKGAISFDNL SGASASQRKG DKRILYASET AARAVGGQIT LHAFDAGKLA VGMPIRYLGI
DIGQIQTLDL ITARNEVQAK AVLYPEYVQT FARGGTRFSV VTPQISAAGV EHLDTILQPY
INVEPGRGNP RRDFELQEAT ITDSRYLDGL SIIVEAPEAG SLGIGTPVLF RGLEVGTVTG
MTLGTLSDRV MIAMRISKRY QHLVRNNSVF WLASGYSLDF GLTGGVVKTG TFNQFIRGGI
AFATPPGTPL APKAQEGKHF LLQESEPKEW REWGTALPK