| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1918 |
|---|
| Symbol | kdgR |
|---|
| ID | 5595127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 1928285 |
|---|
| End bp | 1929076 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640921061 |
|---|
| Product | transcriptional regulator KdgR |
|---|
| Protein accession | YP_001458612 |
|---|
| Protein GI | 157161294 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.000000201259 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAACG CAGATCTGGA TAAACAGCCT GATTCTGTAT CTTCCGTGCT AAAAGTTTTT
GGCATTTTGC AGGCGCTGGG TGAAGAGCGC GAAATAGGGA TAACCGAGCT GTCGCAGCGC
GTCATGATGT CAAAAAGCAC CGTTTATCGC TTTTTACAGA CCATGAAAAC CTTAGGTTAT
GTGGCGCAGG AAGGGGAGTC GGAGAAATAT TCCCTGACCC TGAAATTGTT TGAACTGGGC
GCTCGCGCGT TACAAAACGT CGATTTAATT CGTAGCGCAG ATATCCAGAT GCGTGAGATC
TCCCGCCTGA CCAAAGAAAC TATCCACCTC GGCGCACTGG ACGAAGACAG TATTGTTTAC
ATTCACAAAA TTGACTCTAT GTACAATTTG CGCATGTATT CACGGATTGG GCGTCGTAAT
CCGCTGTACA GCACCGCGAT TGGTAAGGTA CTGCTGGCAT GGCGCGATCG CGATGAAGTG
AAGCAAATTC TTGAGGGCGT GGAGTATAAA CGCAGTACCG AGCGGACCAT CACCAGTACA
GAAGCGTTAT TACCCGTTCT GGACCAGGTG CGCGAGCAGG GGTATGGCGA AGATAACGAA
GAGCAGGAAG AAGGGCTGCG ATGCATTGCG GTACCGGTAT TTGATCGCTT TGGCGTGGTC
ATTGCCGGTT TGAGCATCTC CTTCCCGACG TTGCGTTTCT CTGAAGAGCG TTTACAGGAA
TATGTCGCAA TGTTGCATAC CGCAGCGCGC AAAATTTCTG CCCAAATGGG TTATCACGAC
TATCCGTTCT GA
|
|---|
| Protein sequence | MANADLDKQP DSVSSVLKVF GILQALGEER EIGITELSQR VMMSKSTVYR FLQTMKTLGY
VAQEGESEKY SLTLKLFELG ARALQNVDLI RSADIQMREI SRLTKETIHL GALDEDSIVY
IHKIDSMYNL RMYSRIGRRN PLYSTAIGKV LLAWRDRDEV KQILEGVEYK RSTERTITST
EALLPVLDQV REQGYGEDNE EQEEGLRCIA VPVFDRFGVV IAGLSISFPT LRFSEERLQE
YVAMLHTAAR KISAQMGYHD YPF
|
|---|
| |