| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1888 |
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| Symbol | ttuC |
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| ID | 5590902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 1899889 |
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| End bp | 1900974 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640921030 |
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| Product | tartrate dehydrogenase/decarboxylase |
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| Protein accession | YP_001458582 |
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| Protein GI | 157161264 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAA CGATGCGTAT TGCTGCGATA CCGGGAGACG GGATTGGCAA AGAAGTCCTT
CCTGAAGGGA TTCGCGTGTT ACAGGCTGCC GCTGAGCGCT GGGGCTTCGC CTTGAGTTTT
GAGCAAATGG AGTGGGCGAG CTGCGAGTAT TACAGCCATC ACGGTAAAAT GATGCCGGAC
GACTGGCATG AGCAACTTAG CCGTTTCGAC GCCATCTATT TTGGTGCCGT CGGCTGGCCG
GATACCGTTC CGGACCATAT TTCGTTGTGG GGTTCGCTGC TGAAATTTCG TCGTGAATTC
GACCAGTACG TCAACCTGCG CCCGGTTCGT CTCTTTCCTG GCGTTCCCTG CCCGCTGGCG
GGAAAACAGC CTGGCGACAT CGATTTTTAC GTGGTCAGGG AAAACACCGA AGGCGAATAT
TCCTCGCTCG GCGGTAGAGT GAATGAAGGT ACAGAGCATG AAGTCGTCAT TCAGGAATCG
GTATTTACGC GTCGTGGTGT CGATCGCATT TTGCGTTATG CCTTCGAACT TGCGCAAAGC
CGCCCACGTA AGACGCTAAC TTCTGCCACT AAATCGAACG GTTTAGCCAT CAGCATGCCG
TACTGGGATG AGCGAGTGGA AGCAATGGCC GAGAATTACC CGGAGATCCG CTGGGACAAG
CAGCATATTG ATATTCTCTG CGCGCGTTTT GTGATGCAGC CGGAACGCTT CGATGTGGTG
GTGGCGTCCA ATTTGTTTGG CGATATCCTT TCCGATCTTG GCCCGGCCTG CACCGGCACC
ATTGGCATTG CCCCATCCGC CAACCTGAAT CCGGAACGCA CTTTCCCGTC GCTCTTCGAG
CCTGTCCACG GTTCCGCGCC GGATATCTAC GGGAAAAATA TTGCTAACCC TATCGCCACG
ATTTGGGCCG GGGCAATGAT GCTCGATTTT CTCGGCAATG GCGATGAGCG TTTCCAGCAA
GCGCATAACG GTATTCTGGC AGCAATTGAA GAAGTGATTG CTCACGGGCC GAAAACACCT
GATATGAAAG GCAATGCCAC CACGCCACAG GTTGCCGACG CGATTTGCAA AATTATTTTG
CGTTAA
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| Protein sequence | MMKTMRIAAI PGDGIGKEVL PEGIRVLQAA AERWGFALSF EQMEWASCEY YSHHGKMMPD
DWHEQLSRFD AIYFGAVGWP DTVPDHISLW GSLLKFRREF DQYVNLRPVR LFPGVPCPLA
GKQPGDIDFY VVRENTEGEY SSLGGRVNEG TEHEVVIQES VFTRRGVDRI LRYAFELAQS
RPRKTLTSAT KSNGLAISMP YWDERVEAMA ENYPEIRWDK QHIDILCARF VMQPERFDVV
VASNLFGDIL SDLGPACTGT IGIAPSANLN PERTFPSLFE PVHGSAPDIY GKNIANPIAT
IWAGAMMLDF LGNGDERFQQ AHNGILAAIE EVIAHGPKTP DMKGNATTPQ VADAICKIIL
R
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