| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1880 |
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| Symbol | |
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| ID | 5591055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 1895563 |
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| End bp | 1896717 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640921022 |
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| Product | GAF domain/diguanylate cyclase domain-containing protein |
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| Protein accession | YP_001458574 |
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| Protein GI | 157161256 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAGCACT ATTTTTATTA CATTCACTCA AAACATATTA CGTCTTGTTT CATCTTTGTT
GATGATGTTT TATCATGCCT GCAAAGATTA AATAATCAGC ATTTACCCGC CGTATCCTGG
AGTTGTTCCG TGTCAGATCA GATTATCGCC CGCGTCTCGC AATCCCTTGC CAAAGAACAG
TCACTGGAAA GTCTGGTCCG ACAGCTTCTG GAGATGCTGG AAATGGTCAC TGATATGGAA
TCAACCTACC TGACCAAAGT GGATGTCGAA GCGCGCCTGC AGCATATTAT GTTTGCCCGT
AACAGCCAGA AAATGCACAT CCCGGAGAAT TTTACCGTCT CGTGGGATTA CTCGTTATGC
AAACGCGCCA TTGATGAAAA CTGCTTTTTC AGCGATGAAG TCCCCGACCG TTGGGGTGAC
TGTATTGCGG CACGCAATCT TGGCATCACC ACATTTCTGA GCACGCCAAT TCACTTACCG
GATGGATCAT TCTATGGCAC GCTTTGCGCC GCCAGCAGTG AGAAGCGCCA GTGGAGTGAA
CGCGCGGAAC AGGTTTTACA GTTATTCGCC GGACTGATTG CACAATATAT TCAAAAAGAG
GCACTGGTTG AACAGCTGCG CGAAGCCAAT GCTGCGCTGA TTGCGCAATC GTATACCGAC
TCGTTAACCG GGCTACCGAA TCGGCGGGCG ATTTTTGAAA ATCTGACGAC ACTGTTTTCC
CTCGCCCGGC ATCTTAACCA TAAGATAATG ATCGCGTTTA TCGATCTGGA TAACTTCAAA
TTAATCAATG ATCGTTTTGG TCATAATAGT GGCGATCTGT TTCTCATTCA GGTTGGCGAG
CGCCTTAATA CGCTCCAGCA AAATGGCGAA GTTATTGGTC GTCTCGGCGG TGATGAGTTT
TTAGTTGTTT CACTAAACAA CGAGAATGCG GATATTTCGT CGCTGCGAGA ACGCATTCAG
CAGCAAATAC GTGGAGAATA TCACTTAGGT GATGTTGATT TGTATTATCC CGGTGCCAGT
CTTGGCATAG TAGAAGTCGA TCCTGAAACA ACCGATGCAG ACAGTGCCCT GCATGCTGCC
GATATTGCGA TGTATCAGGA GAAAAAACAC AAACAGAAAA CACCTTTTGT CGCGCATCCA
GCGCTACATT CCTGA
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| Protein sequence | MQHYFYYIHS KHITSCFIFV DDVLSCLQRL NNQHLPAVSW SCSVSDQIIA RVSQSLAKEQ
SLESLVRQLL EMLEMVTDME STYLTKVDVE ARLQHIMFAR NSQKMHIPEN FTVSWDYSLC
KRAIDENCFF SDEVPDRWGD CIAARNLGIT TFLSTPIHLP DGSFYGTLCA ASSEKRQWSE
RAEQVLQLFA GLIAQYIQKE ALVEQLREAN AALIAQSYTD SLTGLPNRRA IFENLTTLFS
LARHLNHKIM IAFIDLDNFK LINDRFGHNS GDLFLIQVGE RLNTLQQNGE VIGRLGGDEF
LVVSLNNENA DISSLRERIQ QQIRGEYHLG DVDLYYPGAS LGIVEVDPET TDADSALHAA
DIAMYQEKKH KQKTPFVAHP ALHS
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