| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1871 |
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| Symbol | |
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| ID | 5591173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 1888362 |
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| End bp | 1889837 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640921013 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001458565 |
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| Protein GI | 157161247 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.0774935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCAGT CAACACGTAT TTCCATGGGG TTATTCTTTA AATATTTTTT ATCGTTAACG
AAAATTGATC TTGGTCAAAA CTATATATCT CTGCCATCAA TAAAATCCAG CACTCACATT
GCTCTCCTTT TTATGGTTTC TATGGGTACA CAAAAATTAA AAGCTCAAAG CTTTTTTATT
TTCAGTTTAT TGCTGACGTT AATTTTATTT TGCATTACTA CCTTATATAA CGAAAACACA
AATGTAAAAC TCATCCCACA GATGAATTAC CTGATGGTTG TTGTGGCTTT GTTTTTCCTT
AACGCCGTCA TTTTTCTTTT CATGTTAATG AAATATTTCA CTAACAAACA AATTTTACCA
ACACTCATTT TAAGCCTTGC ATTTTTAAGT AGCCTTATCT ATTTAGTTGA AACCATTGTA
ATTATCCATA AACCAATTAA CGGCAGTACA CTGATCCAGA CAAAGTCGAA TGATGTTTCT
ATTTTCTATA TTTTCCGCCA ACTCAGTTTT ATTTGTTTAA CCTCGCTGGC ACTCTTTTGT
TATGGAAAAG ACAACATCCT TGACAACAAT AAGAAAAAAA CGGGAATCCT GTTGCTGGCG
CTGATTCCTT TTTTAGTTTT TCCCCTTCTG GCACACAATC TGAGCAGTTA TAACGCTGAC
TATTCTTTGT ATGTCGTCGA CTACTGTCCT GACAACCATA CTGCGACCTG GGGAATCAAC
TATACAAAAA TATTGGTTTG TCTGTGGGCA TTTTTACTGT TCTTTATTAT CATGCGTACA
CGATTAGCCA GCGAACTATG GCCATTAATA GCATTATTAT GTCTGGCATC GCTATGCTGC
AACTTACTTC TACTGACTCT GGATGAGTAT AATTACACCA TCTGGTACAT CAGTCGCGGG
ATTGAAGTCT CCAGTAAACT GTTTGTTGTG TCTTTTCTGA TTTATAACAT TTTTCAGGAA
CTGCAACTCT CCAGCAAACT GGCAGTTCAT GATGTGCTGA CCAATATTTA TAATCGGCGC
TACTTTTTCA ACAGCGTAGA GTCATTATTG TCGCGACCTG TTGTTAAGGA CTTCTGTGTC
ATGCTGGTTG ATATTAATCA GTTCAAACGC ATCAATGCCC AATGGGGACA TCGTGTGGGT
GATAAAGTGC TGGTTTCAAT TGTCGATATT ATCCAGCAAA GCATCCGCCC CGATGATATT
TTAGCGCGAC TGGAGGGTGA GGTGTTTGGC TTGCTATTTA CCAAACTCAA TAGTGCCCAG
GCAAAAATCA TTGCGGAACG TATGCGTAAA AATGTCGAAC TCCTGACCGG CTTTAGTAAC
AGATATGATG TTCCTGAACA AATGACCATC AGTATTGGCA CGGTTTTTTC AACGGGTGAC
ACGCGTAATA TCTCGCTTGT CATGACGGAA GCAGATAAAG CCTTACGCGA AGCGAAAAGC
GAGGGGGGCA ACAAAGTGAT TATTCATCAT ATTTAA
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| Protein sequence | MIQSTRISMG LFFKYFLSLT KIDLGQNYIS LPSIKSSTHI ALLFMVSMGT QKLKAQSFFI
FSLLLTLILF CITTLYNENT NVKLIPQMNY LMVVVALFFL NAVIFLFMLM KYFTNKQILP
TLILSLAFLS SLIYLVETIV IIHKPINGST LIQTKSNDVS IFYIFRQLSF ICLTSLALFC
YGKDNILDNN KKKTGILLLA LIPFLVFPLL AHNLSSYNAD YSLYVVDYCP DNHTATWGIN
YTKILVCLWA FLLFFIIMRT RLASELWPLI ALLCLASLCC NLLLLTLDEY NYTIWYISRG
IEVSSKLFVV SFLIYNIFQE LQLSSKLAVH DVLTNIYNRR YFFNSVESLL SRPVVKDFCV
MLVDINQFKR INAQWGHRVG DKVLVSIVDI IQQSIRPDDI LARLEGEVFG LLFTKLNSAQ
AKIIAERMRK NVELLTGFSN RYDVPEQMTI SIGTVFSTGD TRNISLVMTE ADKALREAKS
EGGNKVIIHH I
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